Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RNF223E7ERA6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
RNF223E7ERA6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF223E7ERA6 LIN28AP1-201ENST00000429574 405 ntBASIC16.58■□□□□ 0.24
RNF223E7ERA6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF223E7ERA6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF223E7ERA6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF223E7ERA6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF223E7ERA6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF223E7ERA6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF223E7ERA6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 AL117328.2-201ENST00000624617 1940 ntBASIC16.57■□□□□ 0.24
RNF223E7ERA6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF223E7ERA6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 AC073508.3-201ENST00000619697 1419 ntBASIC16.57■□□□□ 0.24
RNF223E7ERA6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF223E7ERA6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF223E7ERA6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF223E7ERA6 ATP5G1P1-201ENST00000448724 379 ntBASIC16.57■□□□□ 0.24
RNF223E7ERA6 AC104076.2-201ENST00000448912 469 ntBASIC16.57■□□□□ 0.24
RNF223E7ERA6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF223E7ERA6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RNF223E7ERA6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 AC233723.2-201ENST00000623798 2106 ntBASIC16.57■□□□□ 0.24
RNF223E7ERA6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF223E7ERA6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF223E7ERA6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF223E7ERA6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF223E7ERA6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF223E7ERA6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF223E7ERA6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF223E7ERA6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF223E7ERA6 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF223E7ERA6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF223E7ERA6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.56■□□□□ 0.24
RNF223E7ERA6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF223E7ERA6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RNF223E7ERA6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF223E7ERA6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF223E7ERA6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF223E7ERA6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF223E7ERA6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RNF223E7ERA6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF223E7ERA6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF223E7ERA6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF223E7ERA6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF223E7ERA6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 AC010203.1-204ENST00000548782 407 ntBASIC16.55■□□□□ 0.24
RNF223E7ERA6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF223E7ERA6 AL031985.4-201ENST00000642138 673 ntBASIC16.55■□□□□ 0.24
RNF223E7ERA6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF223E7ERA6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF223E7ERA6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF223E7ERA6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF223E7ERA6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.54■□□□□ 0.24
RNF223E7ERA6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RNF223E7ERA6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms