Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT1A5YKK6 IER3-202ENST00000376377 1350 ntBASIC19.18■□□□□ 0.66
CNOT1A5YKK6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.17■□□□□ 0.66
CNOT1A5YKK6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 AC008622.2-201ENST00000617006 1229 ntBASIC19.17■□□□□ 0.66
CNOT1A5YKK6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT1A5YKK6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 AL671277.2-201ENST00000458060 996 ntBASIC19.16■□□□□ 0.66
CNOT1A5YKK6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 CR769767.2-201ENST00000622735 460 ntBASIC19.16■□□□□ 0.66
CNOT1A5YKK6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT1A5YKK6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 C1QL1P1-201ENST00000568105 661 ntBASIC19.15■□□□□ 0.66
CNOT1A5YKK6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.15■□□□□ 0.66
CNOT1A5YKK6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT1A5YKK6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.14■□□□□ 0.66
CNOT1A5YKK6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 AC083849.1-201ENST00000615227 514 ntBASIC19.14■□□□□ 0.65
CNOT1A5YKK6 AC012313.10-201ENST00000623509 926 ntBASIC19.14■□□□□ 0.65
CNOT1A5YKK6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT1A5YKK6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 AC096733.2-201ENST00000609937 1394 ntBASIC19.13■□□□□ 0.65
CNOT1A5YKK6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms