Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 UNC93B2-201ENST00000285383 730 ntBASIC25.35■■□□□ 1.65
LAMB4A4D0S4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 TFP1-202ENST00000475455 1573 ntBASIC25.35■■□□□ 1.65
LAMB4A4D0S4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
LAMB4A4D0S4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 AC211429.1-201ENST00000415277 523 ntBASIC25.34■■□□□ 1.65
LAMB4A4D0S4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC25.34■■□□□ 1.65
LAMB4A4D0S4 KRT18P16-201ENST00000510337 1294 ntBASIC25.33■■□□□ 1.65
LAMB4A4D0S4 RN7SL850P-201ENST00000579959 291 ntBASIC25.33■■□□□ 1.65
LAMB4A4D0S4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LAMB4A4D0S4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.33■■□□□ 1.65
LAMB4A4D0S4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LAMB4A4D0S4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LAMB4A4D0S4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
LAMB4A4D0S4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
LAMB4A4D0S4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.33■■□□□ 1.65
LAMB4A4D0S4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
LAMB4A4D0S4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
LAMB4A4D0S4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 AL355355.2-201ENST00000442321 338 ntBASIC25.32■■□□□ 1.64
LAMB4A4D0S4 ABBA01031674.1-201ENST00000635145 728 ntBASIC25.32■■□□□ 1.64
LAMB4A4D0S4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 AP006587.1-201ENST00000534129 1502 ntBASIC25.32■■□□□ 1.64
LAMB4A4D0S4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LAMB4A4D0S4 GOLGA6L3-201ENST00000507199 1679 ntBASIC25.32■■□□□ 1.64
LAMB4A4D0S4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 AP000525.1-201ENST00000608286 694 ntBASIC25.31■■□□□ 1.64
LAMB4A4D0S4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LAMB4A4D0S4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 DGCR10-201ENST00000609839 495 ntBASIC25.3■■□□□ 1.64
LAMB4A4D0S4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 KRT16P6-202ENST00000425692 1426 ntBASIC25.3■■□□□ 1.64
LAMB4A4D0S4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LAMB4A4D0S4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LAMB4A4D0S4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LAMB4A4D0S4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
LAMB4A4D0S4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
LAMB4A4D0S4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms