Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM28A0A1B0GU29 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM28A0A1B0GU29 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
SMIM28A0A1B0GU29 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SMIM28A0A1B0GU29 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SMIM28A0A1B0GU29 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 SNORA78-201ENST00000459373 127 ntBASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 AL135905.2-201ENST00000584934 1404 ntBASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SMIM28A0A1B0GU29 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 AC116351.2-201ENST00000606540 1585 ntBASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 AL049637.2-201ENST00000641778 930 ntBASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 AP005212.1-201ENST00000581547 1997 ntBASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SMIM28A0A1B0GU29 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 CLDN5-201ENST00000403084 2357 ntBASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 TFP1-202ENST00000475455 1573 ntBASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SMIM28A0A1B0GU29 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMIM28A0A1B0GU29 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SMIM28A0A1B0GU29 AC018553.1-201ENST00000616682 1458 ntBASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms