Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 SLC7A5P1-201ENST00000568957 537 ntBASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 AL137784.2-201ENST00000607332 1000 ntBASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 AC120498.9-201ENST00000339021 3867 ntBASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-3A0A0A6YYJ7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC022517.1-201ENST00000592429 346 ntBASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms