Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 CYP2T1P-201ENST00000432607 1285 ntBASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 AC100791.3-201ENST00000617619 330 ntBASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV27A0A087WT01 AC087289.5-201ENST00000586076 3175 ntBASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 AC105020.6-201ENST00000621523 1217 ntBASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV27A0A087WT01 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 BID-214ENST00000617586 542 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV27A0A087WT01 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 KRT18P68-201ENST00000392293 1000 ntBASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 AL355472.2-201ENST00000422958 438 ntBASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 AC069236.1-201ENST00000604339 616 ntBASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 KRT8P17-201ENST00000453110 1448 ntBASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
TRAV27A0A087WT01 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 AL162430.1-201ENST00000480705 870 ntBASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV27A0A087WT01 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TRAV27A0A087WT01 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms