Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Shroom3Q9QXN0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom3Q9QXN0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom3Q9QXN0 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.28■■□□□ 1.48
Shroom3Q9QXN0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom3Q9QXN0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom3Q9QXN0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.26■■□□□ 1.47
Shroom3Q9QXN0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shroom3Q9QXN0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shroom3Q9QXN0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom3Q9QXN0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom3Q9QXN0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.23■■□□□ 1.47
Shroom3Q9QXN0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom3Q9QXN0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom3Q9QXN0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shroom3Q9QXN0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shroom3Q9QXN0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shroom3Q9QXN0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Shroom3Q9QXN0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom3Q9QXN0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Shroom3Q9QXN0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom3Q9QXN0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom3Q9QXN0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom3Q9QXN0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom3Q9QXN0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom3Q9QXN0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom3Q9QXN0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
Shroom3Q9QXN0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom3Q9QXN0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom3Q9QXN0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
Shroom3Q9QXN0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom3Q9QXN0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.16■■□□□ 1.46
Shroom3Q9QXN0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom3Q9QXN0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.14■■□□□ 1.46
Shroom3Q9QXN0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Shroom3Q9QXN0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Shroom3Q9QXN0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.14■■□□□ 1.45
Shroom3Q9QXN0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.14■■□□□ 1.45
Shroom3Q9QXN0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom3Q9QXN0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.12■■□□□ 1.45
Shroom3Q9QXN0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom3Q9QXN0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.11■■□□□ 1.45
Shroom3Q9QXN0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom3Q9QXN0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom3Q9QXN0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom3Q9QXN0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.09■■□□□ 1.45
Shroom3Q9QXN0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom3Q9QXN0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom3Q9QXN0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Shroom3Q9QXN0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Shroom3Q9QXN0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Shroom3Q9QXN0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Shroom3Q9QXN0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Shroom3Q9QXN0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Shroom3Q9QXN0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.05■■□□□ 1.44
Shroom3Q9QXN0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Shroom3Q9QXN0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Shroom3Q9QXN0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Shroom3Q9QXN0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.04■■□□□ 1.44
Shroom3Q9QXN0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Shroom3Q9QXN0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Shroom3Q9QXN0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Shroom3Q9QXN0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.03■■□□□ 1.44
Shroom3Q9QXN0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Shroom3Q9QXN0 Nkain2-201ENSMUST00000092602 558 ntBASIC24.01■■□□□ 1.43
Shroom3Q9QXN0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Shroom3Q9QXN0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Shroom3Q9QXN0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24■■□□□ 1.43
Shroom3Q9QXN0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.99■■□□□ 1.43
Shroom3Q9QXN0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Shroom3Q9QXN0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Shroom3Q9QXN0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Shroom3Q9QXN0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Shroom3Q9QXN0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
Shroom3Q9QXN0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Shroom3Q9QXN0 Gm7432-201ENSMUST00000210343 879 ntBASIC23.97■■□□□ 1.43
Shroom3Q9QXN0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Shroom3Q9QXN0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Shroom3Q9QXN0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Shroom3Q9QXN0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.95■■□□□ 1.43
Shroom3Q9QXN0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Shroom3Q9QXN0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.95■■□□□ 1.42
Shroom3Q9QXN0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Shroom3Q9QXN0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Shroom3Q9QXN0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Shroom3Q9QXN0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.93■■□□□ 1.42
Shroom3Q9QXN0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Shroom3Q9QXN0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Shroom3Q9QXN0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Shroom3Q9QXN0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Shroom3Q9QXN0 Gm30023-201ENSMUST00000197970 889 ntBASIC23.92■■□□□ 1.42
Shroom3Q9QXN0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Shroom3Q9QXN0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Shroom3Q9QXN0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Shroom3Q9QXN0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Shroom3Q9QXN0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.91■■□□□ 1.42
Shroom3Q9QXN0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Shroom3Q9QXN0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.9■■□□□ 1.42
Shroom3Q9QXN0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Shroom3Q9QXN0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms