Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf13bQ9ET35 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfrsf13bQ9ET35 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf13bQ9ET35 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf13bQ9ET35 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf13bQ9ET35 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf13bQ9ET35 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf13bQ9ET35 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf13bQ9ET35 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf13bQ9ET35 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf13bQ9ET35 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf13bQ9ET35 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf13bQ9ET35 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf13bQ9ET35 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf13bQ9ET35 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnfrsf13bQ9ET35 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf13bQ9ET35 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf13bQ9ET35 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf13bQ9ET35 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.78■□□□□ 0.6
Tnfrsf13bQ9ET35 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf13bQ9ET35 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf13bQ9ET35 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf13bQ9ET35 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf13bQ9ET35 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf13bQ9ET35 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf13bQ9ET35 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf13bQ9ET35 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf13bQ9ET35 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf13bQ9ET35 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf13bQ9ET35 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf13bQ9ET35 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tnfrsf13bQ9ET35 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf13bQ9ET35 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf13bQ9ET35 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf13bQ9ET35 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf13bQ9ET35 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf13bQ9ET35 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf13bQ9ET35 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf13bQ9ET35 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf13bQ9ET35 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf13bQ9ET35 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf13bQ9ET35 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tnfrsf13bQ9ET35 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf13bQ9ET35 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Tnfrsf13bQ9ET35 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf13bQ9ET35 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Tnfrsf13bQ9ET35 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf13bQ9ET35 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfrsf13bQ9ET35 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Tnfrsf13bQ9ET35 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf13bQ9ET35 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf13bQ9ET35 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf13bQ9ET35 Gm24804-201ENSMUST00000174982 85 ntBASIC18.69■□□□□ 0.58
Tnfrsf13bQ9ET35 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfrsf13bQ9ET35 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Tnfrsf13bQ9ET35 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tnfrsf13bQ9ET35 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf13bQ9ET35 Gm16148-201ENSMUST00000119653 893 ntBASIC18.68■□□□□ 0.58
Tnfrsf13bQ9ET35 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf13bQ9ET35 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfrsf13bQ9ET35 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tnfrsf13bQ9ET35 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf13bQ9ET35 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf13bQ9ET35 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tnfrsf13bQ9ET35 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf13bQ9ET35 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf13bQ9ET35 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfrsf13bQ9ET35 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf13bQ9ET35 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfrsf13bQ9ET35 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf13bQ9ET35 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf13bQ9ET35 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfrsf13bQ9ET35 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Tnfrsf13bQ9ET35 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf13bQ9ET35 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf13bQ9ET35 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf13bQ9ET35 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf13bQ9ET35 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf13bQ9ET35 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Tnfrsf13bQ9ET35 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf13bQ9ET35 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf13bQ9ET35 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf13bQ9ET35 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf13bQ9ET35 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf13bQ9ET35 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf13bQ9ET35 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf13bQ9ET35 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf13bQ9ET35 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf13bQ9ET35 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf13bQ9ET35 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf13bQ9ET35 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf13bQ9ET35 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf13bQ9ET35 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf13bQ9ET35 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf13bQ9ET35 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.61■□□□□ 0.57
Tnfrsf13bQ9ET35 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf13bQ9ET35 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Tnfrsf13bQ9ET35 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tnfrsf13bQ9ET35 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf13bQ9ET35 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms