Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YBL095WYBL095W 813 nt7.09□□□□□ -1.27
ATG40Q99325 MIM1YOL026C 342 nt7.09□□□□□ -1.27
ATG40Q99325 GGA2YHR108W 1758 nt7.09□□□□□ -1.27
ATG40Q99325 THP3YPR045C 1413 nt7.09□□□□□ -1.28
ATG40Q99325 REX2YLR059C 810 nt7.08□□□□□ -1.28
ATG40Q99325 PAU5YFL020C 369 nt7.07□□□□□ -1.28
ATG40Q99325 YMR316C-BYMR316C-B 309 nt7.07□□□□□ -1.28
ATG40Q99325 YPT11YNL304W 1254 nt7.07□□□□□ -1.28
ATG40Q99325 NPP2YEL016C 1482 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)BtD(GUC)B 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)DtD(GUC)D 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)G1tD(GUC)G1 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)G2tD(GUC)G2 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)I1tD(GUC)I1 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)I2tD(GUC)I2 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)J1tD(GUC)J1 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)J2tD(GUC)J2 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)J3tD(GUC)J3 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)J4tD(GUC)J4 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)KtD(GUC)K 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)L1tD(GUC)L1 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)L2tD(GUC)L2 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)MtD(GUC)M 72 nt7.06□□□□□ -1.28
ATG40Q99325 tD(GUC)OtD(GUC)O 72 nt7.06□□□□□ -1.28
ATG40Q99325 SPE2YOL052C 1191 nt7.06□□□□□ -1.28
ATG40Q99325 PGC1YPL206C 966 nt7.05□□□□□ -1.28
ATG40Q99325 THI3YDL080C 1830 nt7.04□□□□□ -1.28
ATG40Q99325 NAS2YIL007C 663 nt7.04□□□□□ -1.28
ATG40Q99325 ESS1YJR017C 513 nt7.04□□□□□ -1.28
ATG40Q99325 GAS1YMR307W 1680 nt7.03□□□□□ -1.28
ATG40Q99325 MDL2YPL270W 2322 nt7.03□□□□□ -1.28
ATG40Q99325 tS(GCU)LtS(GCU)L 80 nt7.03□□□□□ -1.28
ATG40Q99325 YMC2YBR104W 990 nt7.03□□□□□ -1.28
ATG40Q99325 IGD1YFR017C 588 nt7.02□□□□□ -1.29
ATG40Q99325 YBR232CYBR232C 360 nt7.01□□□□□ -1.29
ATG40Q99325 PTC6YCR079W 1329 nt7.01□□□□□ -1.29
ATG40Q99325 YKR012CYKR012C 378 nt7□□□□□ -1.29
ATG40Q99325 CDD1YLR245C 429 nt7□□□□□ -1.29
ATG40Q99325 SDS24YBR214W 1584 nt6.99□□□□□ -1.29
ATG40Q99325 LYS20YDL182W 1287 nt6.99□□□□□ -1.29
ATG40Q99325 MRS4YKR052C 915 nt6.99□□□□□ -1.29
ATG40Q99325 AAC3YBR085W 924 nt6.99□□□□□ -1.29
ATG40Q99325 TMS1YDR105C 1422 nt6.97□□□□□ -1.29
ATG40Q99325 RSM7YJR113C 744 nt6.97□□□□□ -1.29
ATG40Q99325 AAT1YKL106W 1356 nt6.96□□□□□ -1.29
ATG40Q99325 FET5YFL041W 1869 nt6.96□□□□□ -1.29
ATG40Q99325 VBA3YCL069W 1377 nt6.95□□□□□ -1.3
ATG40Q99325 HBS1YKR084C 1836 nt6.95□□□□□ -1.3
ATG40Q99325 PHB2YGR231C 933 nt6.95□□□□□ -1.3
ATG40Q99325 ADH3YMR083W 1128 nt6.95□□□□□ -1.3
ATG40Q99325 TPN1YGL186C 1740 nt6.95□□□□□ -1.3
ATG40Q99325 ENO1YGR254W 1314 nt6.95□□□□□ -1.3
ATG40Q99325 ORT1YOR130C 879 nt6.94□□□□□ -1.3
ATG40Q99325 UFD1YGR048W 1086 nt6.93□□□□□ -1.3
ATG40Q99325 FLX1YIL134W 936 nt6.93□□□□□ -1.3
ATG40Q99325 YIR035CYIR035C 765 nt6.93□□□□□ -1.3
ATG40Q99325 THI6YPL214C 1623 nt6.93□□□□□ -1.3
ATG40Q99325 MOB1YIL106W 945 nt6.92□□□□□ -1.3
ATG40Q99325 EMC3YKL207W 762 nt6.92□□□□□ -1.3
ATG40Q99325 HXT11YOL156W 1704 nt6.92□□□□□ -1.3
ATG40Q99325 TRP2YER090W 1524 nt6.91□□□□□ -1.3
ATG40Q99325 YFR020WYFR020W 699 nt6.91□□□□□ -1.3
ATG40Q99325 tA(AGC)DtA(AGC)D 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)FtA(AGC)F 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)GtA(AGC)G 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)HtA(AGC)H 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)JtA(AGC)J 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)K1tA(AGC)K1 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)K2tA(AGC)K2 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)LtA(AGC)L 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)M1tA(AGC)M1 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)M2tA(AGC)M2 73 nt6.9□□□□□ -1.3
ATG40Q99325 tA(AGC)PtA(AGC)P 73 nt6.9□□□□□ -1.3
ATG40Q99325 CYC3YAL039C 810 nt6.9□□□□□ -1.3
ATG40Q99325 IPL1YPL209C 1104 nt6.9□□□□□ -1.3
ATG40Q99325 snR4snR4 186 nt6.9□□□□□ -1.3
ATG40Q99325 snR86snR86 1004 nt6.89□□□□□ -1.31
ATG40Q99325 SRP102YKL154W 735 nt6.89□□□□□ -1.31
ATG40Q99325 TOM71YHR117W 1920 nt6.88□□□□□ -1.31
ATG40Q99325 LPD1YFL018C 1500 nt6.88□□□□□ -1.31
ATG40Q99325 YJL009WYJL009W 327 nt6.88□□□□□ -1.31
ATG40Q99325 BUB2YMR055C 921 nt6.88□□□□□ -1.31
ATG40Q99325 YMR210WYMR210W 1350 nt6.87□□□□□ -1.31
ATG40Q99325 SEN2YLR105C 1134 nt6.87□□□□□ -1.31
ATG40Q99325 YLR460CYLR460C 1131 nt6.87□□□□□ -1.31
ATG40Q99325 FIT1YDR534C 1587 nt6.86□□□□□ -1.31
ATG40Q99325 YLR072WYLR072W 2082 nt6.86□□□□□ -1.31
ATG40Q99325 YBR056WYBR056W 1506 nt6.86□□□□□ -1.31
ATG40Q99325 NAP1YKR048C 1254 nt6.85□□□□□ -1.31
ATG40Q99325 DUR3YHL016C 2208 nt6.85□□□□□ -1.31
ATG40Q99325 ADE16YLR028C 1776 nt6.85□□□□□ -1.31
ATG40Q99325 YJR149WYJR149W 1215 nt6.84□□□□□ -1.31
ATG40Q99325 ALR1YOL130W 2580 nt6.83□□□□□ -1.32
ATG40Q99325 YCR025CYCR025C 411 nt6.83□□□□□ -1.32
ATG40Q99325 CHS7YHR142W 951 nt6.83□□□□□ -1.32
ATG40Q99325 YLR280CYLR280C 351 nt6.83□□□□□ -1.32
ATG40Q99325 HEM14YER014W 1620 nt6.83□□□□□ -1.32
ATG40Q99325 POP2YNR052C 1302 nt6.82□□□□□ -1.32
ATG40Q99325 YJL064WYJL064W 396 nt6.82□□□□□ -1.32
ATG40Q99325 LEA1YPL213W 717 nt6.82□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 24.5 ms