Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Chrna3Q8R4G9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.59■■□□□ 1.37
Chrna3Q8R4G9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chrna3Q8R4G9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Chrna3Q8R4G9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Chrna3Q8R4G9 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.58■■□□□ 1.37
Chrna3Q8R4G9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chrna3Q8R4G9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chrna3Q8R4G9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.56■■□□□ 1.36
Chrna3Q8R4G9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chrna3Q8R4G9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
Chrna3Q8R4G9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Chrna3Q8R4G9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Chrna3Q8R4G9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Chrna3Q8R4G9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.51■■□□□ 1.35
Chrna3Q8R4G9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Chrna3Q8R4G9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Chrna3Q8R4G9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chrna3Q8R4G9 Gm30023-201ENSMUST00000197970 889 ntBASIC23.5■■□□□ 1.35
Chrna3Q8R4G9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.49■■□□□ 1.35
Chrna3Q8R4G9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chrna3Q8R4G9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Chrna3Q8R4G9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Chrna3Q8R4G9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Chrna3Q8R4G9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Chrna3Q8R4G9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Chrna3Q8R4G9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Chrna3Q8R4G9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Chrna3Q8R4G9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.35
Chrna3Q8R4G9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Chrna3Q8R4G9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Chrna3Q8R4G9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.45■■□□□ 1.34
Chrna3Q8R4G9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.45■■□□□ 1.34
Chrna3Q8R4G9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Chrna3Q8R4G9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.45■■□□□ 1.34
Chrna3Q8R4G9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.44■■□□□ 1.34
Chrna3Q8R4G9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.44■■□□□ 1.34
Chrna3Q8R4G9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Chrna3Q8R4G9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.43■■□□□ 1.34
Chrna3Q8R4G9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.43■■□□□ 1.34
Chrna3Q8R4G9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Chrna3Q8R4G9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chrna3Q8R4G9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chrna3Q8R4G9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chrna3Q8R4G9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chrna3Q8R4G9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chrna3Q8R4G9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chrna3Q8R4G9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chrna3Q8R4G9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chrna3Q8R4G9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chrna3Q8R4G9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chrna3Q8R4G9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Chrna3Q8R4G9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Chrna3Q8R4G9 Gm7432-201ENSMUST00000210343 879 ntBASIC23.38■■□□□ 1.33
Chrna3Q8R4G9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chrna3Q8R4G9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chrna3Q8R4G9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.37■■□□□ 1.33
Chrna3Q8R4G9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Chrna3Q8R4G9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chrna3Q8R4G9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Chrna3Q8R4G9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chrna3Q8R4G9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chrna3Q8R4G9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Chrna3Q8R4G9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.35■■□□□ 1.33
Chrna3Q8R4G9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chrna3Q8R4G9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Chrna3Q8R4G9 Amer2-203ENSMUST00000225247 2662 ntBASIC23.34■■□□□ 1.33
Chrna3Q8R4G9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Chrna3Q8R4G9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chrna3Q8R4G9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chrna3Q8R4G9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Chrna3Q8R4G9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chrna3Q8R4G9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.33■■□□□ 1.32
Chrna3Q8R4G9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chrna3Q8R4G9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chrna3Q8R4G9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chrna3Q8R4G9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chrna3Q8R4G9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.3■■□□□ 1.32
Chrna3Q8R4G9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Chrna3Q8R4G9 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.29■■□□□ 1.32
Chrna3Q8R4G9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Chrna3Q8R4G9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
Chrna3Q8R4G9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
Chrna3Q8R4G9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chrna3Q8R4G9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chrna3Q8R4G9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.27■■□□□ 1.32
Chrna3Q8R4G9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Chrna3Q8R4G9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Chrna3Q8R4G9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.27■■□□□ 1.32
Chrna3Q8R4G9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chrna3Q8R4G9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chrna3Q8R4G9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Chrna3Q8R4G9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.26■■□□□ 1.31
Chrna3Q8R4G9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chrna3Q8R4G9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Chrna3Q8R4G9 Gm11599-201ENSMUST00000118720 878 ntBASIC23.24■■□□□ 1.31
Chrna3Q8R4G9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.24■■□□□ 1.31
Chrna3Q8R4G9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Chrna3Q8R4G9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.23■■□□□ 1.31
Chrna3Q8R4G9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms