Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc12Q8K5B8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.94■□□□□ 0.78
Hoxc12Q8K5B8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxc12Q8K5B8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxc12Q8K5B8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.93■□□□□ 0.78
Hoxc12Q8K5B8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hoxc12Q8K5B8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc12Q8K5B8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxc12Q8K5B8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Hoxc12Q8K5B8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc12Q8K5B8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxc12Q8K5B8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.91■□□□□ 0.78
Hoxc12Q8K5B8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hoxc12Q8K5B8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc12Q8K5B8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.9■□□□□ 0.78
Hoxc12Q8K5B8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Hoxc12Q8K5B8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxc12Q8K5B8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.89■□□□□ 0.77
Hoxc12Q8K5B8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hoxc12Q8K5B8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc12Q8K5B8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc12Q8K5B8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc12Q8K5B8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.88■□□□□ 0.77
Hoxc12Q8K5B8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc12Q8K5B8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc12Q8K5B8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc12Q8K5B8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc12Q8K5B8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc12Q8K5B8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc12Q8K5B8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.86■□□□□ 0.77
Hoxc12Q8K5B8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.85■□□□□ 0.77
Hoxc12Q8K5B8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hoxc12Q8K5B8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.85■□□□□ 0.77
Hoxc12Q8K5B8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc12Q8K5B8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc12Q8K5B8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc12Q8K5B8 Gm11599-201ENSMUST00000118720 878 ntBASIC19.84■□□□□ 0.77
Hoxc12Q8K5B8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Hoxc12Q8K5B8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc12Q8K5B8 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.84■□□□□ 0.77
Hoxc12Q8K5B8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc12Q8K5B8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc12Q8K5B8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc12Q8K5B8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc12Q8K5B8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc12Q8K5B8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc12Q8K5B8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.82■□□□□ 0.76
Hoxc12Q8K5B8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc12Q8K5B8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc12Q8K5B8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc12Q8K5B8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
Hoxc12Q8K5B8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc12Q8K5B8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
Hoxc12Q8K5B8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc12Q8K5B8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc12Q8K5B8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc12Q8K5B8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hoxc12Q8K5B8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc12Q8K5B8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc12Q8K5B8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc12Q8K5B8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.79■□□□□ 0.76
Hoxc12Q8K5B8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc12Q8K5B8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc12Q8K5B8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Hoxc12Q8K5B8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc12Q8K5B8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc12Q8K5B8 Gm30023-201ENSMUST00000197970 889 ntBASIC19.77■□□□□ 0.76
Hoxc12Q8K5B8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc12Q8K5B8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc12Q8K5B8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc12Q8K5B8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.76■□□□□ 0.75
Hoxc12Q8K5B8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc12Q8K5B8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxc12Q8K5B8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxc12Q8K5B8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxc12Q8K5B8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.73■□□□□ 0.75
Hoxc12Q8K5B8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc12Q8K5B8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxc12Q8K5B8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc12Q8K5B8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Hoxc12Q8K5B8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc12Q8K5B8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc12Q8K5B8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc12Q8K5B8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc12Q8K5B8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc12Q8K5B8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.71■□□□□ 0.75
Hoxc12Q8K5B8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc12Q8K5B8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc12Q8K5B8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hoxc12Q8K5B8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc12Q8K5B8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc12Q8K5B8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc12Q8K5B8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc12Q8K5B8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.7■□□□□ 0.74
Hoxc12Q8K5B8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Hoxc12Q8K5B8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc12Q8K5B8 Particl-201ENSMUST00000205370 1560 ntBASIC19.69■□□□□ 0.74
Hoxc12Q8K5B8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hoxc12Q8K5B8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc12Q8K5B8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms