Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
Depdc1bQ8BH88 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Depdc1bQ8BH88 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Depdc1bQ8BH88 Gm6821-201ENSMUST00000107540 542 ntBASIC25.9■■□□□ 1.74
Depdc1bQ8BH88 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.9■■□□□ 1.74
Depdc1bQ8BH88 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.73
Depdc1bQ8BH88 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Depdc1bQ8BH88 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Depdc1bQ8BH88 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Depdc1bQ8BH88 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Depdc1bQ8BH88 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Depdc1bQ8BH88 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Depdc1bQ8BH88 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Depdc1bQ8BH88 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.85■■□□□ 1.73
Depdc1bQ8BH88 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.85■■□□□ 1.73
Depdc1bQ8BH88 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.84■■□□□ 1.73
Depdc1bQ8BH88 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Depdc1bQ8BH88 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.83■■□□□ 1.73
Depdc1bQ8BH88 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Depdc1bQ8BH88 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Depdc1bQ8BH88 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Depdc1bQ8BH88 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Depdc1bQ8BH88 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Depdc1bQ8BH88 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.8■■□□□ 1.72
Depdc1bQ8BH88 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Depdc1bQ8BH88 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Depdc1bQ8BH88 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Depdc1bQ8BH88 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Depdc1bQ8BH88 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Depdc1bQ8BH88 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.72
Depdc1bQ8BH88 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.76■■□□□ 1.71
Depdc1bQ8BH88 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Depdc1bQ8BH88 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Depdc1bQ8BH88 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Depdc1bQ8BH88 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Depdc1bQ8BH88 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Depdc1bQ8BH88 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Depdc1bQ8BH88 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
Depdc1bQ8BH88 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Depdc1bQ8BH88 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.7■■□□□ 1.7
Depdc1bQ8BH88 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.7■■□□□ 1.7
Depdc1bQ8BH88 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Depdc1bQ8BH88 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Depdc1bQ8BH88 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Depdc1bQ8BH88 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Depdc1bQ8BH88 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.68■■□□□ 1.7
Depdc1bQ8BH88 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Depdc1bQ8BH88 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Depdc1bQ8BH88 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Depdc1bQ8BH88 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Depdc1bQ8BH88 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Depdc1bQ8BH88 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Depdc1bQ8BH88 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Depdc1bQ8BH88 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Depdc1bQ8BH88 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Depdc1bQ8BH88 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Depdc1bQ8BH88 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.64■■□□□ 1.7
Depdc1bQ8BH88 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Depdc1bQ8BH88 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Depdc1bQ8BH88 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.62■■□□□ 1.69
Depdc1bQ8BH88 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Depdc1bQ8BH88 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Depdc1bQ8BH88 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Depdc1bQ8BH88 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Depdc1bQ8BH88 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.61■■□□□ 1.69
Depdc1bQ8BH88 Nkain2-201ENSMUST00000092602 558 ntBASIC25.61■■□□□ 1.69
Depdc1bQ8BH88 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Depdc1bQ8BH88 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Depdc1bQ8BH88 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.6■■□□□ 1.69
Depdc1bQ8BH88 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Depdc1bQ8BH88 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Depdc1bQ8BH88 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Depdc1bQ8BH88 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Depdc1bQ8BH88 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Depdc1bQ8BH88 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Depdc1bQ8BH88 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Depdc1bQ8BH88 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Depdc1bQ8BH88 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.57■■□□□ 1.68
Depdc1bQ8BH88 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Depdc1bQ8BH88 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Depdc1bQ8BH88 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Depdc1bQ8BH88 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Depdc1bQ8BH88 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Depdc1bQ8BH88 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.55■■□□□ 1.68
Depdc1bQ8BH88 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Depdc1bQ8BH88 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
Depdc1bQ8BH88 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Depdc1bQ8BH88 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Depdc1bQ8BH88 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Depdc1bQ8BH88 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1bQ8BH88 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.52■■□□□ 1.68
Depdc1bQ8BH88 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1bQ8BH88 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Depdc1bQ8BH88 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Depdc1bQ8BH88 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Depdc1bQ8BH88 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Depdc1bQ8BH88 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Depdc1bQ8BH88 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Depdc1bQ8BH88 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Depdc1bQ8BH88 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms