Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 TMEM63B-203ENST00000371893 2921 ntTSL 1 (best)25.92■■□□□ 1.741e-9■■■■■ 26.8
PABPN1Q86U42 YJEFN3-202ENST00000458210 2785 ntTSL 225.84■■□□□ 1.732e-14■■■■■ 26.8
PABPN1Q86U42 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.421e-9■■■■■ 26.8
PABPN1Q86U42 TMEM63B-209ENST00000533121 2465 ntTSL 1 (best)22.47■■□□□ 1.191e-9■■■■■ 26.8
PABPN1Q86U42 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.431e-9■■■■■ 26.8
PABPN1Q86U42 MTCO1P40-201ENST00000574371 625 ntBASIC12.28□□□□□ -0.441e-7■■■■■ 26.8
PABPN1Q86U42 IFT172-215ENST00000494163 607 ntTSL 327.89■■■□□ 2.061e-6■■■■■ 26.8
PABPN1Q86U42 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.222e-9■■■■■ 26.8
PABPN1Q86U42 GGT1-224ENST00000466310 1249 ntTSL 1 (best)40.71■■■■■ 4.113e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-206ENST00000404223 952 ntTSL 2 BASIC39.16■■■■□ 3.863e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC37.68■■■■□ 3.623e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC36.77■■■■□ 3.483e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC36.53■■■■□ 3.443e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC34.35■■■■□ 3.093e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-210ENST00000412658 2091 ntTSL 531.16■■■□□ 2.583e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-227ENST00000490087 538 ntTSL 527.37■■□□□ 1.973e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-213ENST00000425895 2632 ntTSL 225.59■■□□□ 1.693e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.613e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.453e-8■■■■□ 26.7
PABPN1Q86U42 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.043e-8■■■■□ 26.7
PABPN1Q86U42 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC48.46■■■■■ 5.353e-7■■■■□ 26.7
PABPN1Q86U42 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC46.26■■■■■ 53e-7■■■■□ 26.7
PABPN1Q86U42 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC44.54■■■■■ 4.723e-7■■■■□ 26.7
PABPN1Q86U42 MUM1-203ENST00000586067 500 ntTSL 444.06■■■■■ 4.643e-7■■■■□ 26.7
PABPN1Q86U42 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC43.14■■■■■ 4.53e-7■■■■□ 26.7
PABPN1Q86U42 OTUB1-205ENST00000535140 638 ntTSL 338.88■■■■□ 3.813e-7■■■■□ 26.7
PABPN1Q86U42 MUM1-207ENST00000588888 1264 ntTSL 338.13■■■■□ 3.693e-7■■■■□ 26.7
PABPN1Q86U42 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC37.89■■■■□ 3.664e-7■■■■□ 26.7
PABPN1Q86U42 PKN3-202ENST00000483521 597 ntTSL 536.33■■■■□ 3.413e-7■■■■□ 26.7
PABPN1Q86U42 RGL2-241ENST00000476616 1141 ntTSL 534.37■■■■□ 3.093e-7■■■■□ 26.7
PABPN1Q86U42 RGL2-240ENST00000471319 1037 ntTSL 532.46■■■□□ 2.793e-7■■■■□ 26.7
PABPN1Q86U42 NOL6-205ENST00000464829 1829 ntTSL 229.24■■■□□ 2.273e-7■■■■□ 26.7
PABPN1Q86U42 CHTF18-212ENST00000493715 691 ntTSL 329.18■■■□□ 2.266e-7■■■■□ 26.7
PABPN1Q86U42 RGL2-245ENST00000491168 2316 ntTSL 228.48■■■□□ 2.153e-7■■■■□ 26.7
PABPN1Q86U42 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.083e-7■■■■□ 26.7
PABPN1Q86U42 AARS2-202ENST00000491573 735 ntTSL 227.92■■■□□ 2.063e-7■■■■□ 26.7
PABPN1Q86U42 MUM1-213ENST00000591627 1461 ntTSL 227.24■■□□□ 1.953e-7■■■■□ 26.7
PABPN1Q86U42 MUM1-212ENST00000591453 2453 ntTSL 1 (best)26.83■■□□□ 1.893e-7■■■■□ 26.7
PABPN1Q86U42 PELP1-209ENST00000573242 574 ntTSL 226.44■■□□□ 1.823e-7■■■■□ 26.7
PABPN1Q86U42 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.753e-7■■■■□ 26.7
PABPN1Q86U42 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC25.3■■□□□ 1.643e-7■■■■□ 26.7
PABPN1Q86U42 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.513e-7■■■■□ 26.7
PABPN1Q86U42 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.463e-7■■■■□ 26.7
PABPN1Q86U42 MUM1-205ENST00000587460 2793 ntTSL 1 (best)23.83■■□□□ 1.43e-7■■■■□ 26.7
PABPN1Q86U42 RGL2-243ENST00000483151 2772 ntTSL 223.13■■□□□ 1.293e-7■■■■□ 26.7
PABPN1Q86U42 WWP2-217ENST00000569297 2462 ntTSL 223.02■■□□□ 1.283e-7■■■■□ 26.7
PABPN1Q86U42 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.273e-7■■■■□ 26.7
PABPN1Q86U42 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC22.83■■□□□ 1.253e-7■■■■□ 26.7
PABPN1Q86U42 RGL2-238ENST00000437840 2687 ntTSL 1 (best)22.41■■□□□ 1.183e-7■■■■□ 26.7
PABPN1Q86U42 LIG1-213ENST00000596672 792 ntTSL 321.81■■□□□ 1.089e-7■■■■□ 26.7
PABPN1Q86U42 NOL6-203ENST00000379470 2190 ntTSL 221.68■■□□□ 1.063e-7■■■■□ 26.7
PABPN1Q86U42 FBXO18-205ENST00000461504 835 ntTSL 518.14■□□□□ 0.493e-7■■■■□ 26.7
PABPN1Q86U42 NOL6-201ENST00000297990 4741 ntAPPRIS P1 TSL 1 (best)18.09■□□□□ 0.493e-7■■■■□ 26.7
PABPN1Q86U42 MUM1-214ENST00000591806 4067 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.463e-7■■■■□ 26.7
PABPN1Q86U42 FBXO18-202ENST00000379999 3702 ntTSL 1 (best) BASIC16.95■□□□□ 0.33e-7■■■■□ 26.7
PABPN1Q86U42 NOL6-202ENST00000353159 3411 ntTSL 1 (best)16.79■□□□□ 0.283e-7■■■■□ 26.7
PABPN1Q86U42 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.13e-7■■■■□ 26.7
PABPN1Q86U42 NOL6-204ENST00000379471 3843 ntTSL 5 BASIC15.16■□□□□ 0.023e-7■■■■□ 26.7
PABPN1Q86U42 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC26■■□□□ 1.752e-22■■■■□ 26.7
PABPN1Q86U42 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.482e-22■■■■□ 26.7
PABPN1Q86U42 PRDX2-203ENST00000466174 1717 ntTSL 1 (best)22.45■■□□□ 1.192e-22■■■■□ 26.7
PABPN1Q86U42 HOOK2-213ENST00000589765 108 ntTSL 517.7■□□□□ 0.422e-22■■■■□ 26.7
PABPN1Q86U42 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC30.44■■■□□ 2.468e-8■■■■□ 26.7
PABPN1Q86U42 MYO18A-206ENST00000529889 698 ntTSL 228.56■■■□□ 2.161e-19■■■■□ 26.7
PABPN1Q86U42 TCIRG1-203ENST00000524870 830 ntTSL 1 (best)44.62■■■■■ 4.734e-8■■■■□ 26.6
PABPN1Q86U42 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.639e-7■■■■□ 26.5
PABPN1Q86U42 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.639e-7■■■■□ 26.5
PABPN1Q86U42 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.619e-7■■■■□ 26.5
PABPN1Q86U42 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.569e-7■■■■□ 26.5
PABPN1Q86U42 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.099e-7■■■■□ 26.5
PABPN1Q86U42 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.669e-7■■■■□ 26.5
PABPN1Q86U42 AGPAT1-208ENST00000490711 2448 ntTSL 214.86□□□□□ -0.039e-7■■■■□ 26.5
PABPN1Q86U42 TCIRG1-211ENST00000530449 525 ntTSL 1 (best)44.74■■■■■ 4.752e-16■■■■□ 26.5
PABPN1Q86U42 MAN2C1-204ENST00000561693 1152 ntTSL 536.06■■■■□ 3.364e-7■■■■□ 26.4
PABPN1Q86U42 MAN2C1-221ENST00000564929 851 ntTSL 527.56■■■□□ 24e-7■■■■□ 26.4
PABPN1Q86U42 MAN2C1-205ENST00000562067 710 ntTSL 527.56■■■□□ 24e-7■■■■□ 26.4
PABPN1Q86U42 HGS-210ENST00000573320 547 ntTSL 330.3■■■□□ 2.446e-10■■■■□ 26.4
PABPN1Q86U42 PIDD1-209ENST00000531286 1937 ntTSL 235.04■■■■□ 3.21e-6■■■■□ 26.3
PABPN1Q86U42 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC24.47■■□□□ 1.511e-6■■■■□ 26.3
PABPN1Q86U42 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.41e-6■■■■□ 26.3
PABPN1Q86U42 PIDD1-204ENST00000525028 3175 ntTSL 1 (best)21.99■■□□□ 1.111e-6■■■■□ 26.3
PABPN1Q86U42 PIDD1-205ENST00000527357 4496 ntTSL 221.16■□□□□ 0.981e-6■■■■□ 26.3
PABPN1Q86U42 PIDD1-203ENST00000524486 3917 ntTSL 220.16■□□□□ 0.821e-6■■■■□ 26.3
PABPN1Q86U42 PIDD1-210ENST00000534525 3994 ntTSL 218.78■□□□□ 0.61e-6■■■■□ 26.3
PABPN1Q86U42 FTCD-206ENST00000460011 1260 ntTSL 1 (best)38.79■■■■□ 3.82e-9■■■■□ 26.3
PABPN1Q86U42 FANCA-208ENST00000561722 696 ntTSL 323.95■■□□□ 1.422e-7■■■■□ 26.2
PABPN1Q86U42 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC39.3■■■■□ 3.881e-6■■■■□ 26.1
PABPN1Q86U42 ALDH16A1-205ENST00000594549 681 ntTSL 237.35■■■■□ 3.571e-6■■■■□ 26.1
PABPN1Q86U42 ALDH16A1-204ENST00000593417 2343 ntTSL 236.74■■■■□ 3.471e-6■■■■□ 26.1
PABPN1Q86U42 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC33.26■■■□□ 2.911e-6■■■■□ 26.1
PABPN1Q86U42 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC32.65■■■□□ 2.821e-6■■■■□ 26.1
PABPN1Q86U42 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC30.36■■■□□ 2.455e-7■■■■□ 26.1
PABPN1Q86U42 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.414e-9■■■■□ 26.1
PABPN1Q86U42 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.081e-6■■■■□ 26.1
PABPN1Q86U42 ALDH16A1-207ENST00000599652 3995 ntTSL 221.69■■□□□ 1.061e-6■■■■□ 26.1
PABPN1Q86U42 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC23.31■■□□□ 1.323e-9■■■■□ 26
PABPN1Q86U42 TTLL4-202ENST00000392102 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.243e-9■■■■□ 26
PABPN1Q86U42 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC13.81□□□□□ -0.23e-9■■■■□ 26
PABPN1Q86U42 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.413e-9■■■■□ 26
PABPN1Q86U42 MAPK8IP3-206ENST00000563868 890 ntTSL 234.21■■■■□ 3.076e-10■■■■□ 26
Retrieved 100 of 8,254 protein–RNA pairs in 314.4 ms