Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Commd3Q63829 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Commd3Q63829 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Commd3Q63829 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Commd3Q63829 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.72■□□□□ 0.75
Commd3Q63829 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Commd3Q63829 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Commd3Q63829 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Commd3Q63829 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.71■□□□□ 0.75
Commd3Q63829 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Commd3Q63829 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Commd3Q63829 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Commd3Q63829 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Commd3Q63829 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Commd3Q63829 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Commd3Q63829 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Commd3Q63829 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
Commd3Q63829 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Commd3Q63829 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Commd3Q63829 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.69■□□□□ 0.74
Commd3Q63829 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Commd3Q63829 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Commd3Q63829 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Commd3Q63829 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Commd3Q63829 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Commd3Q63829 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Commd3Q63829 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Commd3Q63829 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Commd3Q63829 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Commd3Q63829 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Commd3Q63829 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Commd3Q63829 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Commd3Q63829 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Commd3Q63829 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Commd3Q63829 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Commd3Q63829 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Commd3Q63829 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Commd3Q63829 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Commd3Q63829 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Commd3Q63829 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Commd3Q63829 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Commd3Q63829 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.64■□□□□ 0.73
Commd3Q63829 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.64■□□□□ 0.73
Commd3Q63829 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Commd3Q63829 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Commd3Q63829 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Commd3Q63829 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Commd3Q63829 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Commd3Q63829 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Commd3Q63829 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Commd3Q63829 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.62■□□□□ 0.73
Commd3Q63829 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Commd3Q63829 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Commd3Q63829 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.6■□□□□ 0.73
Commd3Q63829 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.6■□□□□ 0.73
Commd3Q63829 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Commd3Q63829 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Commd3Q63829 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Commd3Q63829 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Commd3Q63829 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Commd3Q63829 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Commd3Q63829 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Commd3Q63829 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Commd3Q63829 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Commd3Q63829 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.58■□□□□ 0.73
Commd3Q63829 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Commd3Q63829 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Commd3Q63829 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Commd3Q63829 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Commd3Q63829 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Commd3Q63829 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Commd3Q63829 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Commd3Q63829 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Commd3Q63829 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Commd3Q63829 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Commd3Q63829 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Commd3Q63829 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Commd3Q63829 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Commd3Q63829 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Commd3Q63829 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Commd3Q63829 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Commd3Q63829 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Commd3Q63829 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Commd3Q63829 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Commd3Q63829 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Commd3Q63829 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.53■□□□□ 0.72
Commd3Q63829 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Commd3Q63829 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Commd3Q63829 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Commd3Q63829 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Commd3Q63829 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Commd3Q63829 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Commd3Q63829 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.5■□□□□ 0.71
Commd3Q63829 Peli2-204ENSMUST00000226513 1320 ntBASIC19.5■□□□□ 0.71
Commd3Q63829 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Commd3Q63829 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Commd3Q63829 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Commd3Q63829 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Commd3Q63829 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Commd3Q63829 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms