Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
H3f3aP84244 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H3f3aP84244 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
H3f3aP84244 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.35■■□□□ 1.01
H3f3aP84244 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
H3f3aP84244 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.35■■□□□ 1.01
H3f3aP84244 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
H3f3aP84244 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.35■■□□□ 1.01
H3f3aP84244 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
H3f3aP84244 Nkain2-201ENSMUST00000092602 558 ntBASIC21.34■■□□□ 1.01
H3f3aP84244 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
H3f3aP84244 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
H3f3aP84244 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3f3aP84244 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
H3f3aP84244 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3f3aP84244 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
H3f3aP84244 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.33■■□□□ 1.01
H3f3aP84244 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
H3f3aP84244 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.31■■□□□ 1
H3f3aP84244 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
H3f3aP84244 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
H3f3aP84244 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.31■■□□□ 1
H3f3aP84244 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
H3f3aP84244 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.3■■□□□ 1
H3f3aP84244 Gm30023-201ENSMUST00000197970 889 ntBASIC21.3■■□□□ 1
H3f3aP84244 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
H3f3aP84244 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H3f3aP84244 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H3f3aP84244 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
H3f3aP84244 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.28■■□□□ 1
H3f3aP84244 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.28■■□□□ 1
H3f3aP84244 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
H3f3aP84244 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
H3f3aP84244 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
H3f3aP84244 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H3f3aP84244 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H3f3aP84244 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
H3f3aP84244 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3f3aP84244 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H3f3aP84244 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H3f3aP84244 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
H3f3aP84244 Gm8503-201ENSMUST00000118131 455 ntBASIC21.23■□□□□ 0.99
H3f3aP84244 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3f3aP84244 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3f3aP84244 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H3f3aP84244 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
H3f3aP84244 Gm6821-201ENSMUST00000107540 542 ntBASIC21.22■□□□□ 0.99
H3f3aP84244 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3f3aP84244 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
H3f3aP84244 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3f3aP84244 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
H3f3aP84244 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
H3f3aP84244 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
H3f3aP84244 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3f3aP84244 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
H3f3aP84244 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3f3aP84244 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3f3aP84244 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
H3f3aP84244 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
H3f3aP84244 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.18■□□□□ 0.98
H3f3aP84244 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
H3f3aP84244 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
H3f3aP84244 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.17■□□□□ 0.98
H3f3aP84244 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.17■□□□□ 0.98
H3f3aP84244 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3f3aP84244 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
H3f3aP84244 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3f3aP84244 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
H3f3aP84244 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.15■□□□□ 0.98
H3f3aP84244 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
H3f3aP84244 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
H3f3aP84244 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.14■□□□□ 0.98
H3f3aP84244 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
H3f3aP84244 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H3f3aP84244 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
H3f3aP84244 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H3f3aP84244 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.13■□□□□ 0.97
H3f3aP84244 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.12■□□□□ 0.97
H3f3aP84244 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.12■□□□□ 0.97
H3f3aP84244 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.11■□□□□ 0.97
H3f3aP84244 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
H3f3aP84244 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H3f3aP84244 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.1■□□□□ 0.97
H3f3aP84244 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H3f3aP84244 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
H3f3aP84244 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
H3f3aP84244 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H3f3aP84244 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.09■□□□□ 0.97
H3f3aP84244 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.09■□□□□ 0.97
H3f3aP84244 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
H3f3aP84244 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.08■□□□□ 0.97
H3f3aP84244 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.07■□□□□ 0.96
H3f3aP84244 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3aP84244 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3aP84244 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3aP84244 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.06■□□□□ 0.96
H3f3aP84244 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.06■□□□□ 0.96
H3f3aP84244 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H3f3aP84244 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
H3f3aP84244 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms