Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Six5P70178 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Six5P70178 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Six5P70178 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Six5P70178 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Six5P70178 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Six5P70178 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.36■■□□□ 1.17
Six5P70178 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.36■■□□□ 1.17
Six5P70178 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Six5P70178 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Six5P70178 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Six5P70178 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Six5P70178 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Six5P70178 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Six5P70178 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Six5P70178 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Six5P70178 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Six5P70178 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.32■■□□□ 1.16
Six5P70178 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Six5P70178 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Six5P70178 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Six5P70178 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Six5P70178 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Six5P70178 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Six5P70178 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Six5P70178 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.3■■□□□ 1.16
Six5P70178 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Six5P70178 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Six5P70178 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Six5P70178 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Six5P70178 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.27■■□□□ 1.16
Six5P70178 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Six5P70178 Gm30023-201ENSMUST00000197970 889 ntBASIC22.27■■□□□ 1.16
Six5P70178 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Six5P70178 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Six5P70178 Nkain2-201ENSMUST00000092602 558 ntBASIC22.27■■□□□ 1.16
Six5P70178 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Six5P70178 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Six5P70178 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Six5P70178 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Six5P70178 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Six5P70178 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.25■■□□□ 1.15
Six5P70178 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.25■■□□□ 1.15
Six5P70178 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Six5P70178 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Six5P70178 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Six5P70178 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Six5P70178 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Six5P70178 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Six5P70178 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
Six5P70178 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.21■■□□□ 1.15
Six5P70178 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Six5P70178 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Six5P70178 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Six5P70178 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.2■■□□□ 1.14
Six5P70178 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Six5P70178 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Six5P70178 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Six5P70178 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.19■■□□□ 1.14
Six5P70178 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Six5P70178 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Six5P70178 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Six5P70178 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Six5P70178 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Six5P70178 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Six5P70178 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Six5P70178 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Six5P70178 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.15■■□□□ 1.14
Six5P70178 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.15■■□□□ 1.14
Six5P70178 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Six5P70178 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Six5P70178 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Six5P70178 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Six5P70178 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Six5P70178 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Six5P70178 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Six5P70178 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Six5P70178 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Six5P70178 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.11■■□□□ 1.13
Six5P70178 Gm6821-201ENSMUST00000107540 542 ntBASIC22.11■■□□□ 1.13
Six5P70178 Gm8503-201ENSMUST00000118131 455 ntBASIC22.1■■□□□ 1.13
Six5P70178 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Six5P70178 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.09■■□□□ 1.13
Six5P70178 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Six5P70178 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Six5P70178 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Six5P70178 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Six5P70178 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Six5P70178 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Six5P70178 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Six5P70178 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Six5P70178 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.06■■□□□ 1.12
Six5P70178 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Six5P70178 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Six5P70178 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Six5P70178 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Six5P70178 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Six5P70178 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Six5P70178 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Six5P70178 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms