Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-2D3Z4R4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nkx6-2D3Z4R4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nkx6-2D3Z4R4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx6-2D3Z4R4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx6-2D3Z4R4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-2D3Z4R4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-2D3Z4R4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nkx6-2D3Z4R4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-2D3Z4R4 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.36■□□□□ 0.69
Nkx6-2D3Z4R4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nkx6-2D3Z4R4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nkx6-2D3Z4R4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nkx6-2D3Z4R4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-2D3Z4R4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-2D3Z4R4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-2D3Z4R4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx6-2D3Z4R4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.33■□□□□ 0.68
Nkx6-2D3Z4R4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nkx6-2D3Z4R4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-2D3Z4R4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nkx6-2D3Z4R4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-2D3Z4R4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.29■□□□□ 0.68
Nkx6-2D3Z4R4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-2D3Z4R4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-2D3Z4R4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-2D3Z4R4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.28■□□□□ 0.68
Nkx6-2D3Z4R4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-2D3Z4R4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Nkx6-2D3Z4R4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-2D3Z4R4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-2D3Z4R4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-2D3Z4R4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-2D3Z4R4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nkx6-2D3Z4R4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-2D3Z4R4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-2D3Z4R4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Nkx6-2D3Z4R4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkx6-2D3Z4R4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-2D3Z4R4 Gm25238-201ENSMUST00000174914 89 ntBASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-2D3Z4R4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-2D3Z4R4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.21■□□□□ 0.67
Nkx6-2D3Z4R4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-2D3Z4R4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-2D3Z4R4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-2D3Z4R4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-2D3Z4R4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-2D3Z4R4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-2D3Z4R4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-2D3Z4R4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.19■□□□□ 0.66
Nkx6-2D3Z4R4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-2D3Z4R4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx6-2D3Z4R4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx6-2D3Z4R4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Nkx6-2D3Z4R4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.16■□□□□ 0.66
Nkx6-2D3Z4R4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-2D3Z4R4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-2D3Z4R4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms