Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Trav12-1A0N8R1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav12-1A0N8R1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav12-1A0N8R1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav12-1A0N8R1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav12-1A0N8R1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trav12-1A0N8R1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav12-1A0N8R1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12-1A0N8R1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12-1A0N8R1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav12-1A0N8R1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav12-1A0N8R1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav12-1A0N8R1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav12-1A0N8R1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav12-1A0N8R1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Trav12-1A0N8R1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav12-1A0N8R1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav12-1A0N8R1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav12-1A0N8R1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav12-1A0N8R1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trav12-1A0N8R1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav12-1A0N8R1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.92■□□□□ 0.78
Trav12-1A0N8R1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav12-1A0N8R1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav12-1A0N8R1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12-1A0N8R1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12-1A0N8R1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12-1A0N8R1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12-1A0N8R1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav12-1A0N8R1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav12-1A0N8R1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav12-1A0N8R1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav12-1A0N8R1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trav12-1A0N8R1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.88■□□□□ 0.77
Trav12-1A0N8R1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav12-1A0N8R1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav12-1A0N8R1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav12-1A0N8R1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav12-1A0N8R1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav12-1A0N8R1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav12-1A0N8R1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav12-1A0N8R1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav12-1A0N8R1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trav12-1A0N8R1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav12-1A0N8R1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trav12-1A0N8R1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav12-1A0N8R1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav12-1A0N8R1 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.81■□□□□ 0.76
Trav12-1A0N8R1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav12-1A0N8R1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav12-1A0N8R1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav12-1A0N8R1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.8■□□□□ 0.76
Trav12-1A0N8R1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav12-1A0N8R1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.8■□□□□ 0.76
Trav12-1A0N8R1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Trav12-1A0N8R1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav12-1A0N8R1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trav12-1A0N8R1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.79■□□□□ 0.76
Trav12-1A0N8R1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav12-1A0N8R1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav12-1A0N8R1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trav12-1A0N8R1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav12-1A0N8R1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav12-1A0N8R1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav12-1A0N8R1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.77■□□□□ 0.76
Trav12-1A0N8R1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.77■□□□□ 0.76
Trav12-1A0N8R1 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.77■□□□□ 0.76
Trav12-1A0N8R1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trav12-1A0N8R1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-1A0N8R1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-1A0N8R1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-1A0N8R1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-1A0N8R1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-1A0N8R1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-1A0N8R1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12-1A0N8R1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12-1A0N8R1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trav12-1A0N8R1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12-1A0N8R1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12-1A0N8R1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trav12-1A0N8R1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav12-1A0N8R1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12-1A0N8R1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12-1A0N8R1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12-1A0N8R1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.73■□□□□ 0.75
Trav12-1A0N8R1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-1A0N8R1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-1A0N8R1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-1A0N8R1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav12-1A0N8R1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-1A0N8R1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.72■□□□□ 0.75
Trav12-1A0N8R1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-1A0N8R1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12-1A0N8R1 Zfp131-205ENSMUST00000223812 663 ntBASIC19.71■□□□□ 0.75
Trav12-1A0N8R1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12-1A0N8R1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12-1A0N8R1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12-1A0N8R1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12-1A0N8R1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trav12-1A0N8R1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms