Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-2A0A0G2JF93 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13n-2A0A0G2JF93 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav13n-2A0A0G2JF93 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13n-2A0A0G2JF93 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav13n-2A0A0G2JF93 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13n-2A0A0G2JF93 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav13n-2A0A0G2JF93 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-2A0A0G2JF93 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-2A0A0G2JF93 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav13n-2A0A0G2JF93 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13n-2A0A0G2JF93 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav13n-2A0A0G2JF93 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-2A0A0G2JF93 Gm25262-201ENSMUST00000174934 133 ntBASIC15.65■□□□□ 0.1
Trav13n-2A0A0G2JF93 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-2A0A0G2JF93 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-2A0A0G2JF93 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-2A0A0G2JF93 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-2A0A0G2JF93 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav13n-2A0A0G2JF93 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-2A0A0G2JF93 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-2A0A0G2JF93 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-2A0A0G2JF93 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav13n-2A0A0G2JF93 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav13n-2A0A0G2JF93 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav13n-2A0A0G2JF93 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-2A0A0G2JF93 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav13n-2A0A0G2JF93 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Trav13n-2A0A0G2JF93 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-2A0A0G2JF93 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-2A0A0G2JF93 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-2A0A0G2JF93 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-2A0A0G2JF93 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13n-2A0A0G2JF93 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-2A0A0G2JF93 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-2A0A0G2JF93 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav13n-2A0A0G2JF93 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-2A0A0G2JF93 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-2A0A0G2JF93 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-2A0A0G2JF93 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-2A0A0G2JF93 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav13n-2A0A0G2JF93 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Trav13n-2A0A0G2JF93 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-2A0A0G2JF93 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13n-2A0A0G2JF93 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-2A0A0G2JF93 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-2A0A0G2JF93 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-2A0A0G2JF93 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-2A0A0G2JF93 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav13n-2A0A0G2JF93 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Trav13n-2A0A0G2JF93 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav13n-2A0A0G2JF93 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13n-2A0A0G2JF93 AC166822.3-201ENSMUST00000227394 661 ntBASIC15.57■□□□□ 0.08
Trav13n-2A0A0G2JF93 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-2A0A0G2JF93 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.55■□□□□ 0.08
Trav13n-2A0A0G2JF93 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-2A0A0G2JF93 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-2A0A0G2JF93 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-2A0A0G2JF93 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-2A0A0G2JF93 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-2A0A0G2JF93 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-2A0A0G2JF93 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-2A0A0G2JF93 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-2A0A0G2JF93 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-2A0A0G2JF93 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-2A0A0G2JF93 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-2A0A0G2JF93 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-2A0A0G2JF93 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-2A0A0G2JF93 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.53■□□□□ 0.08
Trav13n-2A0A0G2JF93 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-2A0A0G2JF93 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-2A0A0G2JF93 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.53■□□□□ 0.08
Trav13n-2A0A0G2JF93 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-2A0A0G2JF93 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13n-2A0A0G2JF93 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-2A0A0G2JF93 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav13n-2A0A0G2JF93 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-2A0A0G2JF93 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-2A0A0G2JF93 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13n-2A0A0G2JF93 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-2A0A0G2JF93 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.5■□□□□ 0.07
Trav13n-2A0A0G2JF93 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav13n-2A0A0G2JF93 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-2A0A0G2JF93 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-2A0A0G2JF93 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13n-2A0A0G2JF93 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-2A0A0G2JF93 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-2A0A0G2JF93 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav13n-2A0A0G2JF93 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-2A0A0G2JF93 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-2A0A0G2JF93 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms