Protein–RNA interactions for Protein: A0A075B5R6

Ighv11-1, Immunoglobulin heavy variable 11-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv11-1A0A075B5R6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ighv11-1A0A075B5R6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ighv11-1A0A075B5R6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.96■■□□□ 1.43
Ighv11-1A0A075B5R6 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.96■■□□□ 1.43
Ighv11-1A0A075B5R6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ighv11-1A0A075B5R6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.95■■□□□ 1.42
Ighv11-1A0A075B5R6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.95■■□□□ 1.42
Ighv11-1A0A075B5R6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Ighv11-1A0A075B5R6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ighv11-1A0A075B5R6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.94■■□□□ 1.42
Ighv11-1A0A075B5R6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ighv11-1A0A075B5R6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ighv11-1A0A075B5R6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ighv11-1A0A075B5R6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.92■■□□□ 1.42
Ighv11-1A0A075B5R6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ighv11-1A0A075B5R6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Ighv11-1A0A075B5R6 Gm30023-201ENSMUST00000197970 889 ntBASIC23.91■■□□□ 1.42
Ighv11-1A0A075B5R6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Ighv11-1A0A075B5R6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ighv11-1A0A075B5R6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ighv11-1A0A075B5R6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ighv11-1A0A075B5R6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ighv11-1A0A075B5R6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
Ighv11-1A0A075B5R6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.87■■□□□ 1.41
Ighv11-1A0A075B5R6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Ighv11-1A0A075B5R6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Ighv11-1A0A075B5R6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
Ighv11-1A0A075B5R6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ighv11-1A0A075B5R6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.84■■□□□ 1.41
Ighv11-1A0A075B5R6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Ighv11-1A0A075B5R6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ighv11-1A0A075B5R6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ighv11-1A0A075B5R6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ighv11-1A0A075B5R6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.82■■□□□ 1.4
Ighv11-1A0A075B5R6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ighv11-1A0A075B5R6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Ighv11-1A0A075B5R6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ighv11-1A0A075B5R6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ighv11-1A0A075B5R6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.8■■□□□ 1.4
Ighv11-1A0A075B5R6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ighv11-1A0A075B5R6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ighv11-1A0A075B5R6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.78■■□□□ 1.4
Ighv11-1A0A075B5R6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.77■■□□□ 1.4
Ighv11-1A0A075B5R6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ighv11-1A0A075B5R6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.77■■□□□ 1.4
Ighv11-1A0A075B5R6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ighv11-1A0A075B5R6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ighv11-1A0A075B5R6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.76■■□□□ 1.39
Ighv11-1A0A075B5R6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ighv11-1A0A075B5R6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ighv11-1A0A075B5R6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.75■■□□□ 1.39
Ighv11-1A0A075B5R6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ighv11-1A0A075B5R6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv11-1A0A075B5R6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv11-1A0A075B5R6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv11-1A0A075B5R6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ighv11-1A0A075B5R6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ighv11-1A0A075B5R6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ighv11-1A0A075B5R6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.71■■□□□ 1.39
Ighv11-1A0A075B5R6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ighv11-1A0A075B5R6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.38
Ighv11-1A0A075B5R6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ighv11-1A0A075B5R6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ighv11-1A0A075B5R6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ighv11-1A0A075B5R6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Ighv11-1A0A075B5R6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ighv11-1A0A075B5R6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ighv11-1A0A075B5R6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.68■■□□□ 1.38
Ighv11-1A0A075B5R6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ighv11-1A0A075B5R6 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.68■■□□□ 1.38
Ighv11-1A0A075B5R6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ighv11-1A0A075B5R6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ighv11-1A0A075B5R6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ighv11-1A0A075B5R6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ighv11-1A0A075B5R6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ighv11-1A0A075B5R6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ighv11-1A0A075B5R6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ighv11-1A0A075B5R6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ighv11-1A0A075B5R6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ighv11-1A0A075B5R6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.61■■□□□ 1.37
Ighv11-1A0A075B5R6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Ighv11-1A0A075B5R6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv11-1A0A075B5R6 Gm7432-201ENSMUST00000210343 879 ntBASIC23.59■■□□□ 1.37
Ighv11-1A0A075B5R6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv11-1A0A075B5R6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv11-1A0A075B5R6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ighv11-1A0A075B5R6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ighv11-1A0A075B5R6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Ighv11-1A0A075B5R6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ighv11-1A0A075B5R6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ighv11-1A0A075B5R6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Ighv11-1A0A075B5R6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.57■■□□□ 1.36
Ighv11-1A0A075B5R6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ighv11-1A0A075B5R6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Ighv11-1A0A075B5R6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
Ighv11-1A0A075B5R6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ighv11-1A0A075B5R6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ighv11-1A0A075B5R6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ighv11-1A0A075B5R6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ighv11-1A0A075B5R6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms