Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 AC116158.1-201ENST00000560231 2129 ntBASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.38□□□□□ -1.87
LINC01558Q9Y6Z2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC021242.1-201ENST00000507315 2035 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AOX3P-204ENST00000491025 2107 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AL137058.3-201ENST00000624531 3099 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AL109615.1-201ENST00000331979 455 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 BPNT1-202ENST00000354807 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AL035467.1-201ENST00000403583 686 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SKP151-201ENST00000410230 316 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SKP129-201ENST00000410288 299 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AL732414.1-201ENST00000413346 573 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AL022721.1-201ENST00000436521 505 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 NPM1P33-201ENST00000438918 872 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC073072.2-201ENST00000447425 348 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 MYL6P1-201ENST00000449877 453 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 SMIM10L2B-AS1-201ENST00000453528 1027 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 SNX18P26-201ENST00000458433 740 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SL724P-201ENST00000461895 271 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SL658P-201ENST00000463595 303 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 NPM1P29-201ENST00000483112 803 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC116353.1-201ENST00000489727 316 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RPSAP51-201ENST00000497462 645 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01085-203ENST00000511195 326 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RACK1-225ENST00000511566 825 ntTSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 PSAT1P1-201ENST00000518968 1106 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 IGHV3-36-201ENST00000520848 401 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AP002469.1-201ENST00000526011 1043 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 ERH-202ENST00000555373 586 ntTSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC004816.1-202ENST00000557691 629 ntTSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC092868.1-201ENST00000557949 802 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC096708.2-201ENST00000577676 512 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC060780.2-201ENST00000589047 198 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 E2F3P1-201ENST00000589887 1230 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC005034.2-201ENST00000604464 414 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 U47924.1-201ENST00000606539 434 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC006238.1-201ENST00000609787 534 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 MYO5BP1-201ENST00000610994 1239 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC239585.2-201ENST00000624269 557 ntTSL 4 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC005785.2-201ENST00000624655 631 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 CU633904.1-204ENST00000624907 777 ntTSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 MTCO1P25-201ENST00000414449 1799 ntBASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LINC01558Q9Y6Z2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms