Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 RPL12P13-201ENST00000310055 497 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 RN7SKP63-201ENST00000363187 301 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 SNORA3.1-201ENST00000408166 111 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 RN7SKP131-201ENST00000410698 301 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 RPL12P10-201ENST00000413498 498 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL731892.1-201ENST00000437364 1192 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 FUNDC2P2-202ENST00000443452 493 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 RPS15AP29-201ENST00000445539 400 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 RPS18P13-201ENST00000461260 454 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC079944.1-201ENST00000485426 495 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC073648.3-201ENST00000504939 925 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL158211.1-201ENST00000566763 763 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 MIR4685-201ENST00000578185 69 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 MIR5192-201ENST00000579892 92 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 MIR4760-201ENST00000585040 80 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC015801.1-201ENST00000585651 153 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 CYCSP1-201ENST00000604815 315 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC026979.4-201ENST00000606555 645 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC098590.2-201ENST00000614787 281 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL391380.1-201ENST00000439300 1432 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 MAPK10-344ENST00000641718 3746 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 AL136520.1-201ENST00000600311 1322 ntBASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.74□□□□□ -1.33
AMBRA1Q9C0C7 PABPC1P8-201ENST00000452851 2086 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL357556.1-201ENST00000421884 1388 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL592494.2-201ENST00000425455 1548 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms