Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PPARGC1BQ86YN6 CTNNA1P1-201ENST00000515849 2728 ntBASIC11.11□□□□□ -0.63
PPARGC1BQ86YN6 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PPARGC1BQ86YN6 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PPARGC1BQ86YN6 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PPARGC1BQ86YN6 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PPARGC1BQ86YN6 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 RN7SKP137-201ENST00000411074 307 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 SMC4P1-201ENST00000414479 527 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 SCDP1-201ENST00000455244 1081 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 RPSAP7-201ENST00000456871 885 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 RN7SL456P-201ENST00000469290 295 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC108729.1-201ENST00000487812 947 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 RN7SL775P-201ENST00000498361 336 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC016542.3-201ENST00000623520 619 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 AC008993.2-201ENST00000631744 806 ntBASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PPARGC1BQ86YN6 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 MIR640-201ENST00000385086 96 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 RN7SKP85-201ENST00000411349 318 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 RN7SKP30-201ENST00000411373 334 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 VN1R66P-201ENST00000412929 916 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 ZBTB8OSP2-201ENST00000423890 504 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 HBG2-204ENST00000444587 307 ntTSL 2 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 GAPDHP16-201ENST00000448152 962 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 RPL5P11-201ENST00000498068 893 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 RN7SKP253-201ENST00000516424 309 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 RN7SKP98-201ENST00000517070 156 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 RN7SL131P-201ENST00000579043 256 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 AC010463.3-201ENST00000594077 500 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 BNIP3P27-201ENST00000599991 412 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 JAML-213ENST00000640745 951 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 ZNF710-AS1-202ENST00000620791 2133 ntBASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC11.09□□□□□ -0.63
PPARGC1BQ86YN6 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PPARGC1BQ86YN6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PPARGC1BQ86YN6 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PPARGC1BQ86YN6 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC11.08□□□□□ -0.64
PPARGC1BQ86YN6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms