Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 AC106800.1-201ENST00000501221 1362 ntBASIC7.16□□□□□ -1.26
ATG4DQ86TL0 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 PHF2P2-202ENST00000444553 2865 ntBASIC7.16□□□□□ -1.26
ATG4DQ86TL0 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC7.16□□□□□ -1.26
ATG4DQ86TL0 CR848007.1-201ENST00000442354 1699 ntBASIC7.16□□□□□ -1.26
ATG4DQ86TL0 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC127502.2-201ENST00000602663 2351 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 RNU6-40P-201ENST00000384254 107 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 SNORA35-201ENST00000386104 128 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 H2AFZP3-201ENST00000394213 387 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 FCF1P9-201ENST00000412546 282 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 RAP1BP1-201ENST00000412709 553 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 RBMY2GP-201ENST00000418671 1034 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 RBMY2NP-201ENST00000434454 1028 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 TAF9P1-201ENST00000445421 515 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL590004.3-202ENST00000445883 451 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL357037.1-201ENST00000454758 322 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 TAF9P2-201ENST00000454958 515 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL355076.1-201ENST00000484315 270 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 RNU6-1129P-201ENST00000515964 104 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 RNU6-720P-201ENST00000516363 108 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC023050.2-201ENST00000544968 387 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL512310.9-201ENST00000553311 948 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 DNM1P34-202ENST00000567850 315 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC009101.1-201ENST00000568135 242 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC090699.1-201ENST00000586264 321 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC002069.2-201ENST00000603580 883 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC124312.4-201ENST00000605533 310 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 SNORA35B-201ENST00000607417 129 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AL109933.4-201ENST00000612111 157 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 MIR6807-201ENST00000621968 92 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC068137.3-201ENST00000639191 341 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AC073869.6-201ENST00000640656 341 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ATG4DQ86TL0 AP000705.2-201ENST00000433524 1386 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 MTND4P23-201ENST00000447723 1363 ntBASIC7.15□□□□□ -1.26
ATG4DQ86TL0 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 TRAF6P1-201ENST00000429404 1558 ntBASIC7.15□□□□□ -1.27
ATG4DQ86TL0 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ATG4DQ86TL0 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms