Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.57□□□□□ -1.36
COL5A1P20908 AL390198.2-201ENST00000510553 222 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 IGLVIV-64-201ENST00000518581 301 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 EEF1B2P2-201ENST00000519625 676 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.57□□□□□ -1.36
COL5A1P20908 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.57□□□□□ -1.36
COL5A1P20908 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.57□□□□□ -1.36
COL5A1P20908 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.57□□□□□ -1.36
COL5A1P20908 SMIM12P1-201ENST00000603004 274 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 AL590032.1-201ENST00000604920 252 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 AL035410.2-201ENST00000604963 864 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 AC093635.1-201ENST00000609028 555 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 MIR6721-201ENST00000617181 87 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL5A1P20908 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.57□□□□□ -1.36
COL5A1P20908 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COL5A1P20908 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.57□□□□□ -1.36
COL5A1P20908 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL5A1P20908 PSMC1P4-201ENST00000515236 1327 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 RPL11P4-201ENST00000332269 436 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL5A1P20908 RNA5SP321-201ENST00000362722 111 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 RNA5SP474-201ENST00000391234 90 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 RPS7P12-201ENST00000422385 582 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.57□□□□□ -1.36
COL5A1P20908 AL645939.3-201ENST00000435408 225 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 GAPDHP59-201ENST00000435908 267 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 SUMO2P1-206ENST00000445436 284 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 RPL23AP28-201ENST00000448062 470 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.57□□□□□ -1.36
COL5A1P20908 RN7SL187P-201ENST00000495587 303 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.57□□□□□ -1.36
COL5A1P20908 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.57□□□□□ -1.36
COL5A1P20908 AC245052.7-201ENST00000601161 359 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.57□□□□□ -1.36
COL5A1P20908 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
COL5A1P20908 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL5A1P20908 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC6.57□□□□□ -1.36
COL5A1P20908 FLJ42393-201ENST00000623801 2270 ntBASIC6.57□□□□□ -1.36
COL5A1P20908 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC6.56□□□□□ -1.36
COL5A1P20908 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.56□□□□□ -1.36
COL5A1P20908 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL5A1P20908 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
COL5A1P20908 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A1P20908 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
COL5A1P20908 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A1P20908 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.56□□□□□ -1.36
COL5A1P20908 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 RN7SKP78-201ENST00000364711 318 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 RN7SKP47-201ENST00000365347 328 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 RBBP4P5-201ENST00000398583 1266 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 Z68694.1-201ENST00000413929 841 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A1P20908 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A1P20908 RPL26P30-201ENST00000453533 435 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A1P20908 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A1P20908 AC112484.3-201ENST00000505910 329 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A1P20908 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.56□□□□□ -1.36
COL5A1P20908 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.56□□□□□ -1.36
COL5A1P20908 AC002310.3-201ENST00000569728 723 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A1P20908 AC004805.3-201ENST00000603178 310 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 AL365181.4-201ENST00000609800 547 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.56□□□□□ -1.36
COL5A1P20908 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.56□□□□□ -1.36
COL5A1P20908 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL5A1P20908 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms