Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FREM3P0C091 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
FREM3P0C091 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
FREM3P0C091 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
FREM3P0C091 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FREM3P0C091 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 RN7SKP62-201ENST00000384539 329 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 AC245036.1-201ENST00000391727 309 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 FDPSP5-201ENST00000399474 1057 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC6.26□□□□□ -1.41
FREM3P0C091 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
FREM3P0C091 PSMD8P1-201ENST00000436275 769 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 PFN1P11-201ENST00000445829 389 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC004890.1-201ENST00000461005 181 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.26□□□□□ -1.41
FREM3P0C091 AL589765.6-201ENST00000601909 549 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.26□□□□□ -1.41
FREM3P0C091 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.26□□□□□ -1.41
FREM3P0C091 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.26□□□□□ -1.41
FREM3P0C091 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
FREM3P0C091 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.26□□□□□ -1.41
FREM3P0C091 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.26□□□□□ -1.41
FREM3P0C091 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.26□□□□□ -1.41
FREM3P0C091 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.26□□□□□ -1.41
FREM3P0C091 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
FREM3P0C091 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.26□□□□□ -1.41
FREM3P0C091 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.26□□□□□ -1.41
FREM3P0C091 OR7E19P-202ENST00000589942 844 ntBASIC6.26□□□□□ -1.41
FREM3P0C091 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.26□□□□□ -1.41
FREM3P0C091 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.26□□□□□ -1.41
FREM3P0C091 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FREM3P0C091 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
FREM3P0C091 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.25□□□□□ -1.41
FREM3P0C091 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.25□□□□□ -1.41
FREM3P0C091 RPL12P13-201ENST00000310055 497 ntBASIC6.25□□□□□ -1.41
FREM3P0C091 AC019178.1-201ENST00000392337 440 ntBASIC6.25□□□□□ -1.41
FREM3P0C091 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.25□□□□□ -1.41
FREM3P0C091 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.25□□□□□ -1.41
FREM3P0C091 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.25□□□□□ -1.41
FREM3P0C091 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.25□□□□□ -1.41
FREM3P0C091 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
FREM3P0C091 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.25□□□□□ -1.41
FREM3P0C091 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.25□□□□□ -1.41
FREM3P0C091 AL008582.1-201ENST00000609612 442 ntBASIC6.25□□□□□ -1.41
FREM3P0C091 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.25□□□□□ -1.41
FREM3P0C091 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.25□□□□□ -1.41
FREM3P0C091 CLUHP10-201ENST00000631979 980 ntBASIC6.25□□□□□ -1.41
FREM3P0C091 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.25□□□□□ -1.41
FREM3P0C091 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.25□□□□□ -1.41
FREM3P0C091 CDY19P-201ENST00000411668 1613 ntBASIC6.25□□□□□ -1.41
FREM3P0C091 CDY18P-201ENST00000438294 1609 ntBASIC6.25□□□□□ -1.41
FREM3P0C091 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
FREM3P0C091 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.25□□□□□ -1.41
FREM3P0C091 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.25□□□□□ -1.41
FREM3P0C091 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 AC007938.1-201ENST00000562524 2902 ntBASIC6.25□□□□□ -1.41
FREM3P0C091 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.25□□□□□ -1.41
FREM3P0C091 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
FREM3P0C091 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.25□□□□□ -1.41
FREM3P0C091 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
FREM3P0C091 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms