Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MTCO1P19-201ENST00000443487 500 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AL354872.1-201ENST00000456361 967 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AL133480.2-201ENST00000456723 487 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 NMNAT1P3-201ENST00000457517 888 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC008620.1-201ENST00000468453 592 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 C3P1-202ENST00000497718 4954 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC025465.4-201ENST00000513422 638 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AP001646.1-201ENST00000527936 915 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALDH1A1P00352 PHBP2-201ENST00000532859 806 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC016957.1-201ENST00000534895 309 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 MRPL40P1-201ENST00000542687 604 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 ANKRD36BP2-206ENST00000575193 1245 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 MIR378H-201ENST00000579966 83 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 RPL23AP77-201ENST00000588044 463 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AL589765.5-201ENST00000596133 515 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AL133351.5-201ENST00000612789 106 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC023310.4-201ENST00000613130 650 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC122133.1-201ENST00000613964 233 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AL445649.1-201ENST00000615941 691 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC015726.3-201ENST00000624501 418 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 UGP2-232ENST00000640075 567 ntTSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALDH1A1P00352 ABCA17P-204ENST00000494925 3478 ntBASIC9.18□□□□□ -0.94
ALDH1A1P00352 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALDH1A1P00352 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALDH1A1P00352 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
ALDH1A1P00352 TARS-202ENST00000455217 2523 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SLC16A7-214ENST00000552024 1815 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 ANKRD20A17P-201ENST00000511745 1330 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 RNU4-92P-201ENST00000363783 136 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 RN7SKP48-201ENST00000365031 328 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SNORA10-201ENST00000384084 133 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AL358942.1-201ENST00000418595 1178 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC003071.2-201ENST00000423857 315 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 CARM1P1-201ENST00000426329 1185 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 NPM1P24-201ENST00000428039 894 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 GAPDHP75-201ENST00000433910 943 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 TRIM60P8Y-201ENST00000436338 762 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 MRPL42P4-201ENST00000453267 443 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AL451074.1-202ENST00000453762 989 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 RPSAP24-201ENST00000461543 873 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 RN7SL74P-201ENST00000464966 299 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC104763.1-201ENST00000475274 360 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AL928654.1-201ENST00000476081 354 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC010374.1-201ENST00000503762 1237 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC9.17□□□□□ -0.94
ALDH1A1P00352 AC022447.1-201ENST00000515358 464 ntBASIC9.17□□□□□ -0.94
ALDH1A1P00352 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms