Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX4O60224 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.42□□□□□ -1.38
SSX4O60224 AC026336.1-201ENST00000466577 351 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AC105391.1-201ENST00000503155 1045 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AC095057.1-201ENST00000507583 168 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AC093325.1-201ENST00000508378 326 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AC016559.1-201ENST00000511420 199 ntBASIC6.42□□□□□ -1.38
SSX4O60224 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.42□□□□□ -1.38
SSX4O60224 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.42□□□□□ -1.38
SSX4O60224 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 AC018558.5-201ENST00000565840 952 ntBASIC6.42□□□□□ -1.38
SSX4O60224 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.42□□□□□ -1.38
SSX4O60224 AC006116.6-201ENST00000593258 1103 ntBASIC6.42□□□□□ -1.38
SSX4O60224 OR5AH1P-201ENST00000595968 283 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AC024085.1-201ENST00000604299 432 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AC006335.3-201ENST00000613408 292 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AL121985.2-201ENST00000621192 555 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AC034229.6-201ENST00000623704 224 ntBASIC6.42□□□□□ -1.38
SSX4O60224 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SSX4O60224 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.42□□□□□ -1.38
SSX4O60224 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
SSX4O60224 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SSX4O60224 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SSX4O60224 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 MIR138-2-201ENST00000384916 84 ntBASIC6.41□□□□□ -1.38
SSX4O60224 MIR575-201ENST00000385013 94 ntBASIC6.41□□□□□ -1.38
SSX4O60224 BCRP8-201ENST00000412037 255 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX4O60224 AC231533.2-201ENST00000419045 978 ntBASIC6.41□□□□□ -1.38
SSX4O60224 CYP4F32P-201ENST00000426492 504 ntBASIC6.41□□□□□ -1.38
SSX4O60224 RNF11P2-201ENST00000427702 440 ntBASIC6.41□□□□□ -1.38
SSX4O60224 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.41□□□□□ -1.38
SSX4O60224 PHB2P1-201ENST00000434943 890 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AC114755.4-201ENST00000439114 443 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AC011742.2-201ENST00000443818 352 ntBASIC6.41□□□□□ -1.38
SSX4O60224 CDC42P2-201ENST00000448566 569 ntBASIC6.41□□□□□ -1.38
SSX4O60224 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX4O60224 SNORA35.1-201ENST00000458908 128 ntBASIC6.41□□□□□ -1.38
SSX4O60224 RPL5P16-201ENST00000471467 790 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AL928654.1-201ENST00000476081 354 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AC074386.1-206ENST00000487102 761 ntBASIC6.41□□□□□ -1.38
SSX4O60224 RPS10P20-201ENST00000494130 463 ntBASIC6.41□□□□□ -1.38
SSX4O60224 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX4O60224 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 LINC01085-203ENST00000511195 326 ntBASIC6.41□□□□□ -1.38
SSX4O60224 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX4O60224 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX4O60224 SNX18P27-201ENST00000523611 779 ntBASIC6.41□□□□□ -1.38
SSX4O60224 OR7E96P-201ENST00000530816 976 ntBASIC6.41□□□□□ -1.38
SSX4O60224 OR4C1P-201ENST00000530880 937 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX4O60224 AP004833.3-201ENST00000531893 322 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AC087257.2-201ENST00000538759 928 ntBASIC6.41□□□□□ -1.38
SSX4O60224 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX4O60224 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX4O60224 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX4O60224 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.41□□□□□ -1.38
SSX4O60224 AC022001.1-201ENST00000605193 268 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AL136139.1-201ENST00000605568 222 ntBASIC6.41□□□□□ -1.38
SSX4O60224 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.41□□□□□ -1.38
SSX4O60224 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX4O60224 CASC19-232ENST00000641480 1244 ntBASIC6.41□□□□□ -1.38
SSX4O60224 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.41□□□□□ -1.38
SSX4O60224 AL355377.1-201ENST00000621125 1653 ntBASIC6.41□□□□□ -1.38
SSX4O60224 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.41□□□□□ -1.38
SSX4O60224 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX4O60224 AL359195.2-201ENST00000623657 4412 ntBASIC6.41□□□□□ -1.38
SSX4O60224 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.41□□□□□ -1.38
SSX4O60224 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SSX4O60224 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSX4O60224 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 SOCS5P5-201ENST00000402732 1586 ntBASIC6.4□□□□□ -1.38
SSX4O60224 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms