Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AL672212.1-201ENST00000422246 400 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC104698.1-201ENST00000435671 276 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 PSMD8P1-201ENST00000436275 769 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC079193.1-201ENST00000460497 588 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 RN7SKP233-201ENST00000517005 110 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 CHEK2P2-201ENST00000554701 672 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 MIR3135A-201ENST00000578460 77 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 WDR45BP1-201ENST00000583470 1029 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 IGLJCOR18-201ENST00000584002 424 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 SNORD91A-202ENST00000609620 191 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC009220.2-201ENST00000489759 1751 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 AC090771.1-201ENST00000585803 1618 ntBASIC6.43□□□□□ -1.38
NPIPA3F8WFD2 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AL356361.1-201ENST00000400943 1459 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 RN7SKP118-201ENST00000364331 330 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 RPL12P1-201ENST00000374520 498 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 SUMO2P13-201ENST00000403109 272 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 UQCRHP1-204ENST00000424609 274 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 SNRPEP5-201ENST00000425442 278 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AL121916.1-201ENST00000429405 308 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC245047.1-201ENST00000433276 873 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 BX005266.3-201ENST00000443013 1075 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 RPS4XP17-201ENST00000479057 754 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 NATP-201ENST00000523491 878 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC069240.2-201ENST00000550242 609 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 ARGFXP2-201ENST00000579304 949 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 MIR4428-201ENST00000584884 73 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 RPS27AP19-201ENST00000597285 458 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC137695.2-201ENST00000603123 754 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC023513.1-201ENST00000604396 691 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 HCFC2P1-201ENST00000392864 1592 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC009831.5-201ENST00000624000 3189 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC061975.5-201ENST00000584928 1441 ntBASIC6.42□□□□□ -1.38
NPIPA3F8WFD2 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.41□□□□□ -1.38
NPIPA3F8WFD2 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms