Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC114781.3-201ENST00000512083 142 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 PRMT5P1-201ENST00000514351 598 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 NATP-201ENST00000523491 878 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AC130365.2-201ENST00000525882 1201 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AL390726.5-202ENST00000564800 256 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 AC111186.1-201ENST00000604684 130 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 MIR6793-201ENST00000612376 63 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.91□□□□□ -1.3
CHD7Q9P2D1 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 NLRC5-217ENST00000539144 6505 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHD7Q9P2D1 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 RN7SKP281-201ENST00000410472 352 ntBASIC6.9□□□□□ -1.3
CHD7Q9P2D1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 AC008429.2-201ENST00000523057 864 ntBASIC6.9□□□□□ -1.3
CHD7Q9P2D1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 AL359976.1-201ENST00000418655 3528 ntBASIC6.9□□□□□ -1.3
CHD7Q9P2D1 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.9□□□□□ -1.3
CHD7Q9P2D1 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 EREG-201ENST00000244869 4619 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 AC023245.2-201ENST00000530760 2978 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 RN7SKP160-201ENST00000363804 340 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 RNU6-171P-201ENST00000384354 107 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 GSTA6P-201ENST00000424144 582 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 AC108043.1-201ENST00000512696 574 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 RNA5SP434-201ENST00000516647 121 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 EEF1B2P2-201ENST00000519625 676 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 AC004232.1-201ENST00000571388 208 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 COX6CP7-201ENST00000597056 208 ntBASIC6.9□□□□□ -1.31
CHD7Q9P2D1 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CHD7Q9P2D1 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 ATAD2B-201ENST00000238789 8103 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 MYH16-203ENST00000439784 5836 ntBASIC6.89□□□□□ -1.31
CHD7Q9P2D1 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 AC023490.2-201ENST00000359859 470 ntBASIC6.89□□□□□ -1.31
CHD7Q9P2D1 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 AP006222.1-205ENST00000450734 457 ntBASIC6.89□□□□□ -1.31
CHD7Q9P2D1 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 AC011476.1-201ENST00000466725 307 ntBASIC6.89□□□□□ -1.31
CHD7Q9P2D1 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CHD7Q9P2D1 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms