Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 PGAM4P2-201ENST00000512491 721 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC026688.1-201ENST00000520639 1168 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AP001803.1-201ENST00000525668 147 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 SLC25A51P2-201ENST00000535708 889 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 BMS1P16-201ENST00000556075 1147 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 MIR665-201ENST00000635949 72 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 AC068620.4-201ENST00000636730 1182 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 FADS2P1-201ENST00000611807 1446 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 KYNUP2-201ENST00000582280 1329 ntBASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CDK5RAP1Q96SZ6 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC083799.1-201ENST00000366451 910 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 FAM204BP-201ENST00000369171 701 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 RNU6-925P-201ENST00000384629 104 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 RNA5SP53-201ENST00000391299 120 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 MICG-208ENST00000416822 132 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 PPIAP23-201ENST00000420099 497 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC092646.1-201ENST00000427142 901 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 RPL14P5-201ENST00000436474 730 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AL592114.2-201ENST00000440142 532 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 RPL21P33-201ENST00000444831 484 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 MTND3P4-201ENST00000453537 303 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 RPL36AP55-201ENST00000454114 305 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 RPLP0P1-201ENST00000457002 361 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 MTND3P6-201ENST00000485242 339 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AL591122.1-201ENST00000487348 492 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 RPL5P23-201ENST00000496040 868 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC105391.1-201ENST00000503155 1045 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC119751.4-201ENST00000507498 357 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC120036.3-201ENST00000517826 292 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 MTCYBP28-201ENST00000566728 1132 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC061975.5-201ENST00000584928 1441 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC023513.1-201ENST00000604396 691 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 BX322635.1-201ENST00000605804 496 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC104763.3-201ENST00000613765 618 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 AC091046.2-201ENST00000620775 665 ntBASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP1Q96SZ6 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms