Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SPHKAPQ2M3C7 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC9.72□□□□□ -0.85
SPHKAPQ2M3C7 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPHKAPQ2M3C7 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SPHKAPQ2M3C7 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPHKAPQ2M3C7 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
SPHKAPQ2M3C7 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 AL929472.1-201ENST00000417484 429 ntBASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 RPL23AP85-201ENST00000421838 433 ntBASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 BX119917.1-201ENST00000432517 502 ntBASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 AC087575.1-201ENST00000585087 229 ntBASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 TMC3-AS1-206ENST00000612811 2726 ntBASIC9.71□□□□□ -0.85
SPHKAPQ2M3C7 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC9.71□□□□□ -0.86
SPHKAPQ2M3C7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 RN7SKP108-201ENST00000411367 328 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 SNRPBP1-201ENST00000443634 282 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 RPL12P7-201ENST00000493832 494 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC011352.2-201ENST00000514574 1016 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC016144.1-201ENST00000548175 1087 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AL591767.3-201ENST00000554632 525 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 GLYATL1P2-202ENST00000588046 902 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 Six3os1_4.1-201ENST00000615706 324 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 RNA5SP77-201ENST00000365394 120 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC007383.1-201ENST00000445875 636 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC004232.2-201ENST00000574245 821 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC034229.6-201ENST00000623704 224 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC073592.6-201ENST00000624271 415 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 AC005702.3-201ENST00000585345 1447 ntBASIC9.7□□□□□ -0.86
SPHKAPQ2M3C7 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 RNA5SP115-201ENST00000411160 107 ntBASIC9.69□□□□□ -0.86
SPHKAPQ2M3C7 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms