Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC009948.3-201ENST00000603415 1798 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC004014.2-201ENST00000623718 5122 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC074141.1-201ENST00000588129 2995 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 RN7SKP271-201ENST00000410528 320 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 MTND6P1-201ENST00000417434 424 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AL596268.1-201ENST00000427910 1048 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 GAPDHP19-201ENST00000431768 1005 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 RPL12P49-201ENST00000441100 121 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 DEFA11P-201ENST00000446470 261 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 RPL23AP28-201ENST00000448062 470 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 RN7SL187P-201ENST00000495587 303 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC021220.1-201ENST00000507445 630 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AP006587.5-201ENST00000532033 739 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 RN7SL66P-201ENST00000582099 264 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC006328.2-201ENST00000623198 397 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 AC012005.2-201ENST00000624333 397 ntBASIC8.28□□□□□ -1.08
PDS5AQ29RF7 MAPK10-357ENST00000641831 2858 ntBASIC8.27□□□□□ -1.08
PDS5AQ29RF7 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.27□□□□□ -1.08
PDS5AQ29RF7 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
PDS5AQ29RF7 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
PDS5AQ29RF7 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.27□□□□□ -1.08
PDS5AQ29RF7 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.27□□□□□ -1.08
PDS5AQ29RF7 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 GAPDHP57-201ENST00000424400 585 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AC245047.1-201ENST00000433276 873 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 YRDCP3-201ENST00000456507 480 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 SNRPCP6-201ENST00000528310 210 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AC005519.1-201ENST00000554490 601 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 HNRNPA1P74-201ENST00000560782 835 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AL365223.1-201ENST00000574864 1297 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 AC024267.2-201ENST00000582737 417 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 RPL29P33-201ENST00000587474 316 ntBASIC8.27□□□□□ -1.09
PDS5AQ29RF7 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.27□□□□□ -1.09
PDS5AQ29RF7 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PDS5AQ29RF7 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDS5AQ29RF7 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.26□□□□□ -1.09
PDS5AQ29RF7 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.26□□□□□ -1.09
PDS5AQ29RF7 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PDS5AQ29RF7 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.26□□□□□ -1.09
PDS5AQ29RF7 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PDS5AQ29RF7 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
PDS5AQ29RF7 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms