Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.62□□□□□ -1.03
HMGB1P09429 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.62□□□□□ -1.03
HMGB1P09429 AL136298.2-201ENST00000556497 1570 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
HMGB1P09429 MIR137-201ENST00000385223 102 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.62□□□□□ -1.03
HMGB1P09429 GAPDHP15-201ENST00000398586 975 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AL607077.1-201ENST00000401718 499 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AL139039.2-201ENST00000407436 479 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.62□□□□□ -1.03
HMGB1P09429 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC8.62□□□□□ -1.03
HMGB1P09429 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC8.62□□□□□ -1.03
HMGB1P09429 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.62□□□□□ -1.03
HMGB1P09429 RPL31P20-201ENST00000449593 360 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC8.62□□□□□ -1.03
HMGB1P09429 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC8.62□□□□□ -1.03
HMGB1P09429 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.62□□□□□ -1.03
HMGB1P09429 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC8.62□□□□□ -1.03
HMGB1P09429 RPS7P1-201ENST00000571702 585 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.62□□□□□ -1.03
HMGB1P09429 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.62□□□□□ -1.03
HMGB1P09429 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.62□□□□□ -1.03
HMGB1P09429 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 AC022387.2-201ENST00000604050 448 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AL355333.1-201ENST00000605632 279 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AL355480.4-201ENST00000626823 69 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 AC073869.7-201ENST00000640874 297 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
HMGB1P09429 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.62□□□□□ -1.03
HMGB1P09429 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.62□□□□□ -1.03
HMGB1P09429 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.62□□□□□ -1.03
HMGB1P09429 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.62□□□□□ -1.03
HMGB1P09429 RBMY1A3P-201ENST00000382670 1404 ntBASIC8.62□□□□□ -1.03
HMGB1P09429 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.62□□□□□ -1.03
HMGB1P09429 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.62□□□□□ -1.03
HMGB1P09429 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
HMGB1P09429 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.61□□□□□ -1.03
HMGB1P09429 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 AC104581.5-201ENST00000624171 7141 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 AC123769.2-201ENST00000624332 5984 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 SNORA51.7-201ENST00000384171 134 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
HMGB1P09429 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.61□□□□□ -1.03
HMGB1P09429 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.61□□□□□ -1.03
HMGB1P09429 AC073900.1-201ENST00000429766 776 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 AC245047.1-201ENST00000433276 873 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC8.61□□□□□ -1.03
HMGB1P09429 NQO1-204ENST00000439109 924 ntTSL 2 BASIC8.61□□□□□ -1.03
HMGB1P09429 RPL7P14-201ENST00000449851 741 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 AC018892.2-201ENST00000457656 693 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 AC117395.2-201ENST00000463122 1128 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.61□□□□□ -1.03
HMGB1P09429 RN7SL815P-201ENST00000470970 290 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 AC012123.2-201ENST00000485809 248 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 OR9N1P-201ENST00000491296 333 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 UGT2A3P7-201ENST00000510485 734 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC8.61□□□□□ -1.03
HMGB1P09429 BCAS2P1-201ENST00000528022 632 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 AC078878.1-201ENST00000539832 958 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC8.61□□□□□ -1.03
HMGB1P09429 AC137695.2-201ENST00000603123 754 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 AL592494.3-201ENST00000609485 464 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.61□□□□□ -1.03
HMGB1P09429 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC8.61□□□□□ -1.03
HMGB1P09429 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC8.61□□□□□ -1.03
HMGB1P09429 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC8.61□□□□□ -1.03
HMGB1P09429 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.61□□□□□ -1.03
HMGB1P09429 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC8.61□□□□□ -1.03
HMGB1P09429 AC087565.3-202ENST00000642085 1603 ntBASIC8.61□□□□□ -1.03
HMGB1P09429 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
HMGB1P09429 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.6□□□□□ -1.03
HMGB1P09429 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
HMGB1P09429 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
HMGB1P09429 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.6□□□□□ -1.03
HMGB1P09429 AC016251.2-201ENST00000623393 3089 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms