Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SSX6-201ENST00000376932 562 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SNORA70H-201ENST00000383910 135 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SNORA70J-201ENST00000384182 135 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SNORA70.9-201ENST00000384370 135 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 RNU6-1055P-201ENST00000391085 107 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 RFKP1-201ENST00000400940 428 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL353626.3-201ENST00000413399 657 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 BMP2KL-201ENST00000414251 1225 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC004129.1-201ENST00000417617 796 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL122003.1-201ENST00000435206 784 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC104698.1-201ENST00000435671 276 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC092568.1-201ENST00000440950 1284 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 RPL4P2-201ENST00000447259 1282 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 RPS29P5-201ENST00000452777 171 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 KIF3AP1-201ENST00000454055 611 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SETP4-201ENST00000455717 868 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 CR383656.1-201ENST00000484916 377 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 MRPL57P6-201ENST00000506570 309 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC106800.2-201ENST00000514009 1103 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC098679.3-203ENST00000514881 919 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 OR7E96P-201ENST00000530816 976 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SRMP2-201ENST00000553832 916 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 HNRNPA1P71-201ENST00000559135 950 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC010719.1-201ENST00000602992 747 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC068802.1-201ENST00000603420 732 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL352984.2-202ENST00000613699 155 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL138960.1-201ENST00000613838 513 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 EIF5P2-201ENST00000618904 1035 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AP001885.1-201ENST00000621658 558 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AC005383.1-201ENST00000622689 534 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 MFSD8-234ENST00000641503 1082 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC5.23□□□□□ -1.57
AP1S3Q96PC3 AL391380.1-201ENST00000439300 1432 ntBASIC5.23□□□□□ -1.57
AP1S3Q96PC3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 WASF5P-205ENST00000428639 1455 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AL731532.1-201ENST00000623972 4236 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 RNA5SP378-201ENST00000363646 120 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 GAPDHP73-201ENST00000423411 1007 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 UQCRHP1-204ENST00000424609 274 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 FDPSP1-201ENST00000424976 1071 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 NPM1P25-201ENST00000429734 854 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 EIF3IP1-201ENST00000433048 967 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 EFCAB14P1-201ENST00000442409 463 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC5.22□□□□□ -1.57
AP1S3Q96PC3 RPL10P6-201ENST00000457497 318 ntBASIC5.22□□□□□ -1.57
AP1S3Q96PC3 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms