Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
STAG1Q8WVM7 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
STAG1Q8WVM7 AL359694.2-201ENST00000567753 1615 ntBASIC8.43□□□□□ -1.06
STAG1Q8WVM7 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.43□□□□□ -1.06
STAG1Q8WVM7 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
STAG1Q8WVM7 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
STAG1Q8WVM7 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.43□□□□□ -1.06
STAG1Q8WVM7 COL6A4P1-202ENST00000487147 4317 ntBASIC8.43□□□□□ -1.06
STAG1Q8WVM7 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
STAG1Q8WVM7 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 RNA5SP114-201ENST00000363780 113 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 SUMO2P13-201ENST00000403109 272 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 MTND3P20-201ENST00000407663 186 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 VDAC1P10-201ENST00000416715 891 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 PHB2P1-201ENST00000434943 890 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 BX005266.3-201ENST00000443013 1075 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 BX323845.2-201ENST00000458382 234 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 RNU7-157P-201ENST00000459600 66 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 RPSAP48-201ENST00000466509 889 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AP005202.1-201ENST00000489915 867 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 OR5M6P-201ENST00000530227 937 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 BNIP3P7-201ENST00000605641 516 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AP005329.3-201ENST00000609924 686 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AL031777.2-201ENST00000611953 196 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 AC073263.3-201ENST00000624449 858 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 OR4C1P-202ENST00000641065 1569 ntBASIC8.42□□□□□ -1.06
STAG1Q8WVM7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
STAG1Q8WVM7 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AL137058.3-201ENST00000624531 3099 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 RNA5SP429-201ENST00000363688 109 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 VN1R66P-201ENST00000412929 916 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC013268.2-201ENST00000420753 337 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 SLAMF6P1-201ENST00000451067 602 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 SRP68P2-201ENST00000456184 254 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 RBMY2EP-202ENST00000456360 940 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC079193.1-201ENST00000460497 588 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC067805.1-201ENST00000559344 470 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 OR7E19P-202ENST00000589942 844 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC245407.2-201ENST00000614199 451 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 AC091059.2-201ENST00000623355 614 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 CASC19-232ENST00000641480 1244 ntBASIC8.41□□□□□ -1.06
STAG1Q8WVM7 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC8.41□□□□□ -1.06
STAG1Q8WVM7 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms