Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 MFSD8-256ENST00000641949 1640 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC122713.2-201ENST00000624942 3335 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC125232.1-201ENST00000452554 1408 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 PWRN1-212ENST00000569908 1435 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC007993.1-201ENST00000621298 2430 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC112243.1-201ENST00000623949 3851 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 RPL12P13-201ENST00000310055 497 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 MIR1231-201ENST00000408101 92 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 RNU2-5P-201ENST00000410533 180 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC018475.1-201ENST00000478358 465 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AP005202.1-201ENST00000489915 867 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC106760.2-201ENST00000504159 619 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 MIR4685-201ENST00000578185 69 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC143336.1-201ENST00000614164 836 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC004943.1-203ENST00000624370 1074 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC015871.3-201ENST00000618835 2261 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 AC093829.1-201ENST00000506662 1618 ntBASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.35□□□□□ -1.39
NHLRC1Q6VVB1 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AL080312.1-201ENST00000256654 824 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 MIR199B-201ENST00000384849 110 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AC006511.2-201ENST00000388966 660 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 RPS3AP5-201ENST00000389400 821 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 UQCRHP1-204ENST00000424609 274 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 PRDX1P1-201ENST00000449329 596 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 PABPC1P1-201ENST00000506347 591 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AC020765.1-201ENST00000604296 328 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AC012640.3-201ENST00000607847 430 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 MIR6736-201ENST00000616799 59 ntBASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NHLRC1Q6VVB1 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms