Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.56□□□□□ -1.2
UBE3AQ05086 AL049541.2-201ENST00000626377 555 ntBASIC7.56□□□□□ -1.2
UBE3AQ05086 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE3AQ05086 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE3AQ05086 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE3AQ05086 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.56□□□□□ -1.2
UBE3AQ05086 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE3AQ05086 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
UBE3AQ05086 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE3AQ05086 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
UBE3AQ05086 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
UBE3AQ05086 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
UBE3AQ05086 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
UBE3AQ05086 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
UBE3AQ05086 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
UBE3AQ05086 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE3AQ05086 RN7SKP130-201ENST00000364924 301 ntBASIC7.55□□□□□ -1.2
UBE3AQ05086 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
UBE3AQ05086 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE3AQ05086 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE3AQ05086 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE3AQ05086 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE3AQ05086 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE3AQ05086 MTND4LP12-201ENST00000448237 295 ntBASIC7.55□□□□□ -1.2
UBE3AQ05086 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE3AQ05086 RN7SL797P-201ENST00000486314 297 ntBASIC7.55□□□□□ -1.2
UBE3AQ05086 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE3AQ05086 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.55□□□□□ -1.2
UBE3AQ05086 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
UBE3AQ05086 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.55□□□□□ -1.2
UBE3AQ05086 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 AC016590.3-201ENST00000611171 753 ntBASIC7.55□□□□□ -1.2
UBE3AQ05086 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 AC011471.4-201ENST00000638271 216 ntBASIC7.55□□□□□ -1.2
UBE3AQ05086 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE3AQ05086 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 PPBPP2-201ENST00000513150 1362 ntBASIC7.55□□□□□ -1.2
UBE3AQ05086 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
UBE3AQ05086 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.55□□□□□ -1.2
UBE3AQ05086 AC023818.2-201ENST00000623817 2304 ntBASIC7.55□□□□□ -1.2
UBE3AQ05086 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
UBE3AQ05086 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
UBE3AQ05086 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE3AQ05086 AC123769.2-201ENST00000624332 5984 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE3AQ05086 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 AC102941.1-201ENST00000567616 1537 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE3AQ05086 AC093829.1-201ENST00000506662 1618 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 RN7SKP174-201ENST00000363803 330 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 RNU6-1055P-201ENST00000391085 107 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.54□□□□□ -1.2
UBE3AQ05086 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.54□□□□□ -1.2
UBE3AQ05086 RNA5SP155-201ENST00000411154 129 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 THEM7P-201ENST00000419556 672 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 CDC42P6-201ENST00000421246 576 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 RPL7AP51-201ENST00000422016 760 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 AC000089.1-201ENST00000424559 801 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.54□□□□□ -1.2
UBE3AQ05086 NPM1P23-201ENST00000440193 849 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 PPP1R2P6-201ENST00000478565 588 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 AC091917.2-201ENST00000505002 744 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.54□□□□□ -1.2
UBE3AQ05086 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE3AQ05086 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 MIR212-201ENST00000586026 110 ntBASIC7.54□□□□□ -1.2
UBE3AQ05086 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.54□□□□□ -1.2
UBE3AQ05086 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.54□□□□□ -1.2
UBE3AQ05086 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
UBE3AQ05086 AC025162.2-201ENST00000619602 560 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms