Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC017104.5-201ENST00000637647 639 ntBASIC6.64□□□□□ -1.35
CD40P25942 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC6.64□□□□□ -1.35
CD40P25942 FBXL21-201ENST00000297158 1305 ntBASIC6.64□□□□□ -1.35
CD40P25942 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC6.64□□□□□ -1.35
CD40P25942 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC6.64□□□□□ -1.35
CD40P25942 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.64□□□□□ -1.35
CD40P25942 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.64□□□□□ -1.35
CD40P25942 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.64□□□□□ -1.35
CD40P25942 AL022163.1-201ENST00000430261 1569 ntBASIC6.64□□□□□ -1.35
CD40P25942 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.64□□□□□ -1.35
CD40P25942 AOX2P-204ENST00000487742 3284 ntBASIC6.64□□□□□ -1.35
CD40P25942 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC6.64□□□□□ -1.35
CD40P25942 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 MTND5P11-201ENST00000511037 1812 ntBASIC6.64□□□□□ -1.35
CD40P25942 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.64□□□□□ -1.35
CD40P25942 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
CD40P25942 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
CD40P25942 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.64□□□□□ -1.35
CD40P25942 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CD40P25942 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 MRPS17P1-201ENST00000596009 3130 ntBASIC6.63□□□□□ -1.35
CD40P25942 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.63□□□□□ -1.35
CD40P25942 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 RNA5SP448-201ENST00000363151 111 ntBASIC6.63□□□□□ -1.35
CD40P25942 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 SNORA51.7-201ENST00000384171 134 ntBASIC6.63□□□□□ -1.35
CD40P25942 RNU6-1005P-201ENST00000384519 107 ntBASIC6.63□□□□□ -1.35
CD40P25942 RNY3P9-201ENST00000384727 106 ntBASIC6.63□□□□□ -1.35
CD40P25942 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 BCRP8-201ENST00000412037 255 ntBASIC6.63□□□□□ -1.35
CD40P25942 DHFRP2-201ENST00000414224 547 ntBASIC6.63□□□□□ -1.35
CD40P25942 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.63□□□□□ -1.35
CD40P25942 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 PGAM1P3-201ENST00000420790 565 ntBASIC6.63□□□□□ -1.35
CD40P25942 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 DEFB130D-201ENST00000426866 237 ntBASIC6.63□□□□□ -1.35
CD40P25942 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC6.63□□□□□ -1.35
CD40P25942 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 SETP8-201ENST00000435341 628 ntBASIC6.63□□□□□ -1.35
CD40P25942 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.63□□□□□ -1.35
CD40P25942 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 AC245047.2-201ENST00000441060 530 ntBASIC6.63□□□□□ -1.35
CD40P25942 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.63□□□□□ -1.35
CD40P25942 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.63□□□□□ -1.35
CD40P25942 GUCY2GP-201ENST00000479705 3222 ntBASIC6.63□□□□□ -1.35
CD40P25942 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
CD40P25942 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.63□□□□□ -1.35
CD40P25942 AC021146.7-201ENST00000509604 775 ntBASIC6.63□□□□□ -1.35
CD40P25942 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 RN7SKP105-201ENST00000517192 314 ntBASIC6.63□□□□□ -1.35
CD40P25942 UBTFL10-201ENST00000528532 562 ntBASIC6.63□□□□□ -1.35
CD40P25942 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 CYB5AP5-201ENST00000549779 389 ntBASIC6.63□□□□□ -1.35
CD40P25942 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 AC022306.1-201ENST00000560489 1562 ntBASIC6.63□□□□□ -1.35
CD40P25942 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 MIR4685-201ENST00000578185 69 ntBASIC6.63□□□□□ -1.35
CD40P25942 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CD40P25942 AC245036.5-201ENST00000596330 847 ntBASIC6.63□□□□□ -1.35
CD40P25942 AC022150.4-201ENST00000598322 2848 ntBASIC6.63□□□□□ -1.35
CD40P25942 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 AC103724.4-201ENST00000605981 292 ntBASIC6.63□□□□□ -1.35
CD40P25942 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 MIR6731-201ENST00000614863 72 ntBASIC6.63□□□□□ -1.35
CD40P25942 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.63□□□□□ -1.35
CD40P25942 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.63□□□□□ -1.35
CD40P25942 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 AC004232.3-201ENST00000622977 525 ntBASIC6.63□□□□□ -1.35
CD40P25942 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CD40P25942 AL137058.3-201ENST00000624531 3099 ntBASIC6.63□□□□□ -1.35
CD40P25942 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CD40P25942 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.63□□□□□ -1.35
CD40P25942 AC116631.1-202ENST00000640984 683 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms