Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 AC068446.1-201ENST00000556425 1549 ntBASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.79□□□□□ -1.32
AMBRA1Q9C0C7 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 RNU1-24P-201ENST00000364285 165 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 RNA5SP79-201ENST00000365193 109 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 MIR181C-201ENST00000384881 110 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AL117344.1-201ENST00000407196 616 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC091390.2-201ENST00000432573 374 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AL158053.1-201ENST00000441503 453 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC117395.2-201ENST00000463122 1128 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC008799.2-201ENST00000484429 647 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 RPS10P20-201ENST00000494130 463 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC104629.1-201ENST00000494226 508 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC006070.1-201ENST00000508151 193 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC095059.2-201ENST00000510601 933 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC026700.1-201ENST00000512074 544 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 SNORA70.17-201ENST00000516449 133 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC120036.3-201ENST00000517826 292 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AP006587.5-201ENST00000532033 739 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 OR4A1P-201ENST00000532342 920 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC091304.4-201ENST00000565703 620 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 MIR3159-201ENST00000584572 74 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 PRR13P3-201ENST00000603578 376 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC023206.1-201ENST00000605824 298 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC103724.4-201ENST00000605981 292 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AL022238.3-201ENST00000609279 443 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC084824.5-201ENST00000612009 413 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AL512506.1-201ENST00000613918 449 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC005034.3-201ENST00000604845 1747 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 AC006116.1-201ENST00000587908 2171 ntBASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.78□□□□□ -1.32
AMBRA1Q9C0C7 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.32
AMBRA1Q9C0C7 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.77□□□□□ -1.32
AMBRA1Q9C0C7 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
AMBRA1Q9C0C7 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 SNORA30B-201ENST00000365319 129 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 AC092952.1-201ENST00000397646 1209 ntBASIC6.77□□□□□ -1.33
AMBRA1Q9C0C7 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms