Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 RPL23P10-201ENST00000468780 412 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC096661.1-201ENST00000515870 822 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AP002981.1-201ENST00000517692 975 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC025423.2-201ENST00000537570 439 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC097641.3-201ENST00000613523 464 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AL355974.1-201ENST00000618896 1708 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC087894.3-201ENST00000623682 349 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC005753.1-201ENST00000623837 618 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC020923.1-201ENST00000624021 917 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AP003400.2-201ENST00000624036 666 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 AC132825.8-201ENST00000640783 297 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.82□□□□□ -1.16
PGBD4Q96DM1 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.82□□□□□ -1.16
PGBD4Q96DM1 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AL589826.1-201ENST00000340697 249 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 RPL12P1-201ENST00000374520 498 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 MTND3P20-201ENST00000407663 186 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 RNA5SP280-201ENST00000411230 115 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 YWHAZP5-201ENST00000419975 730 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC114402.2-201ENST00000432760 643 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 FTH1P20-201ENST00000434913 548 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 EIF2S2P5-201ENST00000457635 968 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 RN7SL868P-201ENST00000485915 303 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC008868.1-201ENST00000509786 737 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 DCAF13P2-201ENST00000514188 555 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC100854.1-201ENST00000520351 341 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AP005597.2-201ENST00000526238 341 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC009712.1-201ENST00000564938 316 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 WDR45BP1-201ENST00000583470 1029 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 MIR5682-201ENST00000584864 76 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AL133406.3-201ENST00000606817 541 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 U91328.4-201ENST00000608919 517 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC107905.1-201ENST00000616204 426 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 AC139426.3-201ENST00000605648 2059 ntBASIC7.81□□□□□ -1.16
PGBD4Q96DM1 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PGBD4Q96DM1 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PGBD4Q96DM1 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PGBD4Q96DM1 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PGBD4Q96DM1 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
PGBD4Q96DM1 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PGBD4Q96DM1 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms