Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC104115.2-201ENST00000523026 687 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC018523.1-201ENST00000534211 512 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 CUX2P1-201ENST00000606426 298 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC139792.1-201ENST00000607051 647 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AL390882.1-201ENST00000618821 594 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC073488.8-201ENST00000631952 757 ntBASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
TRIM48Q8IWZ4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC025040.2-201ENST00000558657 1852 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC087045.3-201ENST00000623046 2468 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 SNORA2C-201ENST00000408564 137 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 SNX18P13-201ENST00000412442 529 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 RPL35P8-201ENST00000433284 337 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 ELOCP3-201ENST00000439303 348 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 RPL7L1P11-201ENST00000446092 721 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AL451074.4-201ENST00000447545 470 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AL929410.2-201ENST00000451170 189 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 TAAR3P-201ENST00000466706 1078 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 TAAR3P-202ENST00000481759 1025 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 PRELID3BP5-201ENST00000508612 460 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 EEF1A1P37-201ENST00000522748 715 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 OR5AH1P-201ENST00000595968 283 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AL451085.1-201ENST00000604546 690 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC084036.1-201ENST00000609190 508 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AL022238.3-201ENST00000609279 443 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 pRNA.12-201ENST00000614353 90 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 pRNA.3-201ENST00000615048 90 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC074276.2-201ENST00000619891 348 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM48Q8IWZ4 AC119674.1-209ENST00000642031 997 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms