Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 EPS15P1-202ENST00000459691 2071 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 NUCKS1P1-201ENST00000452067 703 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC146944.3-201ENST00000509969 371 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 SAA3P-201ENST00000533267 365 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC079866.1-201ENST00000534985 1220 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AL132640.1-201ENST00000559594 619 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC027796.1-201ENST00000575593 512 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC106782.7-201ENST00000624024 418 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC133555.5-201ENST00000624430 418 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 TSHZ2-205ENST00000626626 670 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 AC140479.4-205ENST00000636339 820 ntBASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
H3F3CQ6NXT2 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 HSPD1P1-201ENST00000503199 1726 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AL031651.1-201ENST00000615357 1438 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 MYO5BP3-201ENST00000431872 1279 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC009518.3-201ENST00000438972 253 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC073476.1-201ENST00000452854 407 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 RN7SL88P-201ENST00000480166 299 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC063962.1-201ENST00000608199 521 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC073263.3-201ENST00000624449 858 ntBASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.54□□□□□ -1.36
H3F3CQ6NXT2 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms