Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC006213.6-201ENST00000623722 4179 ntBASIC5.33□□□□□ -1.56
CXCL1P09341 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.33□□□□□ -1.56
CXCL1P09341 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CXCL1P09341 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CXCL1P09341 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CXCL1P09341 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.33□□□□□ -1.56
CXCL1P09341 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 EEF1A1P15-201ENST00000395772 1408 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 TRIM60P14-201ENST00000513444 1419 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.32□□□□□ -1.56
CXCL1P09341 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.32□□□□□ -1.56
CXCL1P09341 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CXCL1P09341 RN7SKP237-201ENST00000364663 301 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AL360271.1-201ENST00000395679 510 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.32□□□□□ -1.56
CXCL1P09341 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.32□□□□□ -1.56
CXCL1P09341 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.32□□□□□ -1.56
CXCL1P09341 FDPSP6-201ENST00000425091 512 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC5.32□□□□□ -1.56
CXCL1P09341 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.32□□□□□ -1.56
CXCL1P09341 AC104772.1-201ENST00000444764 862 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 REG1CP-206ENST00000447469 496 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC5.32□□□□□ -1.56
CXCL1P09341 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 RN7SL251P-201ENST00000464175 297 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC5.32□□□□□ -1.56
CXCL1P09341 AC109454.1-201ENST00000471205 498 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 SNRPCP3-201ENST00000474888 476 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC5.32□□□□□ -1.56
CXCL1P09341 RN7SL797P-201ENST00000486314 297 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 RN7SL561P-201ENST00000488553 281 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 SNORA58-201ENST00000505219 137 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AC073648.1-201ENST00000508957 930 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC5.32□□□□□ -1.56
CXCL1P09341 OR7E85P-201ENST00000512164 985 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC5.32□□□□□ -1.56
CXCL1P09341 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC5.32□□□□□ -1.56
CXCL1P09341 AP003385.2-201ENST00000524910 973 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC5.32□□□□□ -1.56
CXCL1P09341 AC023310.2-201ENST00000553844 547 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC5.32□□□□□ -1.56
CXCL1P09341 RPS27AP19-201ENST00000597285 458 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AL953862.2-201ENST00000603089 820 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC5.32□□□□□ -1.56
CXCL1P09341 AC004943.1-203ENST00000624370 1074 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC5.32□□□□□ -1.56
CXCL1P09341 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 AL031123.3-201ENST00000623345 1837 ntBASIC5.32□□□□□ -1.56
CXCL1P09341 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC5.32□□□□□ -1.56
CXCL1P09341 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CXCL1P09341 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL1P09341 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CXCL1P09341 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CXCL1P09341 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CXCL1P09341 RPL24P4-201ENST00000326586 421 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL1P09341 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CXCL1P09341 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC092952.1-201ENST00000397646 1209 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL1P09341 OR5W1P-201ENST00000423705 938 ntBASIC5.31□□□□□ -1.56
CXCL1P09341 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms