Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PHF2P2-202ENST00000444553 2865 ntBASIC7.53□□□□□ -1.2
RB1P06400 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RB1P06400 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RB1P06400 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 AC089998.1-201ENST00000548575 3141 ntBASIC7.52□□□□□ -1.21
RB1P06400 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.52□□□□□ -1.21
RB1P06400 AC015871.4-201ENST00000624650 2260 ntBASIC7.52□□□□□ -1.21
RB1P06400 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 RNA5SP308-201ENST00000362532 115 ntBASIC7.52□□□□□ -1.21
RB1P06400 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.52□□□□□ -1.21
RB1P06400 FDPSP5-201ENST00000399474 1057 ntBASIC7.52□□□□□ -1.21
RB1P06400 MIR1282-201ENST00000408865 101 ntBASIC7.52□□□□□ -1.21
RB1P06400 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.52□□□□□ -1.21
RB1P06400 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.52□□□□□ -1.21
RB1P06400 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.52□□□□□ -1.21
RB1P06400 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.52□□□□□ -1.21
RB1P06400 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.52□□□□□ -1.21
RB1P06400 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.52□□□□□ -1.21
RB1P06400 PFN1P8-201ENST00000497012 543 ntBASIC7.52□□□□□ -1.21
RB1P06400 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.52□□□□□ -1.21
RB1P06400 GUSBP9-201ENST00000510138 584 ntBASIC7.52□□□□□ -1.21
RB1P06400 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.52□□□□□ -1.21
RB1P06400 RN7SKP196-201ENST00000516267 345 ntBASIC7.52□□□□□ -1.21
RB1P06400 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.52□□□□□ -1.21
RB1P06400 OR7E154P-201ENST00000525174 932 ntBASIC7.52□□□□□ -1.21
RB1P06400 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.52□□□□□ -1.21
RB1P06400 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.52□□□□□ -1.21
RB1P06400 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.52□□□□□ -1.21
RB1P06400 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.52□□□□□ -1.21
RB1P06400 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.52□□□□□ -1.21
RB1P06400 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.52□□□□□ -1.21
RB1P06400 AL683826.1-201ENST00000624104 627 ntBASIC7.52□□□□□ -1.21
RB1P06400 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RB1P06400 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.52□□□□□ -1.21
RB1P06400 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
RB1P06400 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.52□□□□□ -1.21
RB1P06400 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RB1P06400 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
RB1P06400 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.52□□□□□ -1.21
RB1P06400 AC009948.5-201ENST00000624360 4406 ntBASIC7.51□□□□□ -1.21
RB1P06400 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
RB1P06400 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.51□□□□□ -1.21
RB1P06400 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.51□□□□□ -1.21
RB1P06400 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
RB1P06400 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.51□□□□□ -1.21
RB1P06400 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 RN7SKP174-201ENST00000363803 330 ntBASIC7.51□□□□□ -1.21
RB1P06400 RN7SKP107-201ENST00000364157 290 ntBASIC7.51□□□□□ -1.21
RB1P06400 RN7SKP269-201ENST00000365545 319 ntBASIC7.51□□□□□ -1.21
RB1P06400 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.51□□□□□ -1.21
RB1P06400 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 SNORA70G-201ENST00000383923 142 ntBASIC7.51□□□□□ -1.21
RB1P06400 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 RN7SKP86-201ENST00000410454 332 ntBASIC7.51□□□□□ -1.21
RB1P06400 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.51□□□□□ -1.21
RB1P06400 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
RB1P06400 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.51□□□□□ -1.21
RB1P06400 RN7SL37P-201ENST00000490461 307 ntBASIC7.51□□□□□ -1.21
RB1P06400 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 IGKV2-4-201ENST00000523070 340 ntBASIC7.51□□□□□ -1.21
RB1P06400 OR9G2P-201ENST00000533326 880 ntBASIC7.51□□□□□ -1.21
RB1P06400 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.51□□□□□ -1.21
RB1P06400 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.51□□□□□ -1.21
RB1P06400 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.51□□□□□ -1.21
RB1P06400 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.51□□□□□ -1.21
RB1P06400 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 AC023513.1-201ENST00000604396 691 ntBASIC7.51□□□□□ -1.21
RB1P06400 AL499605.1-201ENST00000604628 403 ntBASIC7.51□□□□□ -1.21
RB1P06400 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.51□□□□□ -1.21
RB1P06400 AC127071.1-201ENST00000624997 712 ntBASIC7.51□□□□□ -1.21
RB1P06400 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RB1P06400 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.51□□□□□ -1.21
RB1P06400 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms