Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 OR4N3P-201ENST00000559395 818 ntBASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 AL023806.2-201ENST00000603042 263 ntBASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 AC018690.1-201ENST00000608144 626 ntBASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 AC135068.4-201ENST00000622949 925 ntBASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 AC087893.2-201ENST00000623272 255 ntBASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 FGL2-202ENST00000637771 989 ntBASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RHBDD3Q9Y3P4 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AC006511.2-201ENST00000388966 660 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 RPS14P4-201ENST00000415880 418 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 NPM1P30-201ENST00000425092 828 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AK3P5-201ENST00000432033 519 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AL034399.1-201ENST00000451535 380 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AC004692.1-201ENST00000455430 424 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AC095057.1-201ENST00000507583 168 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 RN7SKP98-201ENST00000517070 156 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 DPPA3P2-202ENST00000557188 1219 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 UBE2CP4-201ENST00000561405 535 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AL355480.4-201ENST00000626823 69 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AC104837.1-201ENST00000444644 1587 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 XKRY2-202ENST00000623874 1581 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 XKRY-202ENST00000624960 1581 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 AC010168.2-201ENST00000562691 5428 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.18□□□□□ -1.42
RHBDD3Q9Y3P4 MAPK10-344ENST00000641718 3746 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AL590762.1-201ENST00000391782 432 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RPS21P8-201ENST00000413365 247 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AC017104.2-201ENST00000417000 321 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 FABP5P1-201ENST00000423401 411 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 PSMC1P2-201ENST00000423961 1204 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 OR5P4P-201ENST00000424698 917 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 RPS21P1-201ENST00000434479 247 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 FABP5P2-201ENST00000439042 408 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 SNX18P9-201ENST00000440580 835 ntBASIC6.17□□□□□ -1.42
RHBDD3Q9Y3P4 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms