Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SNORA68-201ENST00000384437 133 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 PTGES3P2-201ENST00000407942 482 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 EEF1B2P8-201ENST00000414101 671 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC023141.1-201ENST00000419418 379 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AJ239321.1-201ENST00000424255 564 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC005040.1-201ENST00000437783 482 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AL591379.2-201ENST00000450223 397 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 ZNF736P8Y-201ENST00000451913 669 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 CLIC4P1-201ENST00000453177 535 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC108729.2-201ENST00000476543 840 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC022296.2-201ENST00000512424 202 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 RN7SL14P-201ENST00000579715 298 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC084036.1-201ENST00000609190 508 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 MIR6726-201ENST00000613751 61 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 FAM27E3-202ENST00000614611 340 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC243830.2-201ENST00000618067 630 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC068234.2-201ENST00000619646 522 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC087893.2-201ENST00000623272 255 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC136428.4-201ENST00000634254 1155 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC233280.20-201ENST00000637412 416 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC119674.1-201ENST00000641611 1210 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 AC011008.2-201ENST00000624866 3352 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 HSPA8P11-201ENST00000508840 1898 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PPARGC1AQ9UBK2 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 RNA5SP260-201ENST00000363849 111 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 SNORA30B-201ENST00000365319 129 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 OR13Z1P-201ENST00000416141 834 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 BMS1P13-201ENST00000417301 885 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AC093107.1-201ENST00000422772 609 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 RPL6P2-201ENST00000425480 783 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AC114973.1-201ENST00000429057 632 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 BMS1P11-201ENST00000442351 885 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 FUNDC2P2-202ENST00000443452 493 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 SUMO2P1-206ENST00000445436 284 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AL451074.4-201ENST00000447545 470 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 MORF4L1P4-201ENST00000450245 976 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 BMS1P9-201ENST00000457640 885 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 RN7SL647P-201ENST00000485429 300 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 IGKV2-29-201ENST00000521304 372 ntBASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PPARGC1AQ9UBK2 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms