Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC140479.4-205ENST00000636339 820 ntBASIC8.51□□□□□ -1.05
HMG20BQ9P0W2 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.51□□□□□ -1.05
HMG20BQ9P0W2 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMG20BQ9P0W2 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
HMG20BQ9P0W2 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HMG20BQ9P0W2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMG20BQ9P0W2 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HMG20BQ9P0W2 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 SPATA31C2-201ENST00000324915 3777 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC104581.5-201ENST00000624171 7141 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 RN7SKP91-201ENST00000410852 288 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 ATP5BP1-201ENST00000411980 1574 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 HMGN1P6-201ENST00000438508 291 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AL034399.1-201ENST00000451535 380 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AL096803.1-201ENST00000456921 1021 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC021820.1-201ENST00000525564 808 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 RN7SL366P-201ENST00000577957 292 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 MIR4312-201ENST00000579909 76 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AL049541.2-201ENST00000626377 555 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AC183089.2-201ENST00000637931 916 ntBASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.5□□□□□ -1.05
HMG20BQ9P0W2 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AL773545.3-201ENST00000414297 706 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AC008753.1-201ENST00000423096 284 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AC083855.1-201ENST00000440041 258 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AL354714.5-201ENST00000450131 590 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 PSMA6P2-201ENST00000457574 686 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 RPS4XP23-201ENST00000487801 237 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 IGLC4-201ENST00000517690 248 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 MIR6849-201ENST00000618543 69 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AL138693.1-201ENST00000622219 129 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AC011471.4-201ENST00000638271 216 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AC132219.2-201ENST00000624416 2327 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 CTAGE11P-201ENST00000451540 2353 ntBASIC8.49□□□□□ -1.05
HMG20BQ9P0W2 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms