Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC093844.1-201ENST00000514910 1361 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 MIR99A-201ENST00000384906 81 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 RN7SKP268-201ENST00000411107 316 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 OSTCP2-201ENST00000437956 444 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AL096803.1-201ENST00000456921 1021 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 RPS16P9-201ENST00000477220 427 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 RPS10P28-201ENST00000480396 498 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AF305872.1-201ENST00000485217 471 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 RPL10P7-201ENST00000495649 625 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 IGKV1D-32-201ENST00000517449 318 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 IGLC4-201ENST00000517690 248 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 RN7SL426P-201ENST00000579106 295 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC015818.6-201ENST00000584274 634 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC091768.1-201ENST00000609258 930 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 OR1N1-202ENST00000619659 939 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC025287.2-201ENST00000621911 668 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 AC017037.4-201ENST00000624526 826 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 OR2A3P-202ENST00000641249 1776 ntBASIC7.38□□□□□ -1.23
LMO3Q8TAP4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LMO3Q8TAP4 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 TRIM53CP-201ENST00000531490 1354 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 PPIAP26-201ENST00000377951 522 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 RNU1-56P-201ENST00000391303 164 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 RN7SKP117-201ENST00000410175 264 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 RPS14P4-201ENST00000415880 418 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AL138479.1-201ENST00000426913 484 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 FECHP1-201ENST00000431896 1214 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 PHB2P1-201ENST00000434943 890 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 PMS2P9-201ENST00000441237 515 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC026254.2-201ENST00000475295 371 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 RPL21P42-201ENST00000488408 464 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 RN7SL187P-201ENST00000495587 303 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC021146.11-201ENST00000503319 491 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 MTCYBP44-201ENST00000514835 823 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 RNA5SP278-201ENST00000517055 102 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC087752.2-201ENST00000521219 281 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC091932.1-201ENST00000569381 427 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC060766.1-201ENST00000590824 627 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 AC110597.1-201ENST00000562669 3176 ntBASIC7.37□□□□□ -1.23
LMO3Q8TAP4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
LMO3Q8TAP4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms