Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 RPS7P1-201ENST00000571702 585 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 RN7SL25P-201ENST00000583862 260 ntBASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC50Q8IVM0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 TPTE2P2-201ENST00000403471 1466 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 U3.48-201ENST00000363172 216 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC007790.1-201ENST00000439081 782 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 CT45A11P-201ENST00000448043 1134 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AL034399.1-201ENST00000451535 380 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC018892.2-201ENST00000457656 693 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC011611.6-201ENST00000547483 255 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC243312.1-201ENST00000570582 275 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 MIR4262-201ENST00000578394 54 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AL023806.2-201ENST00000603042 263 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AC078909.2-201ENST00000620584 398 ntBASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC50Q8IVM0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AL355377.1-201ENST00000621125 1653 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC020978.6-201ENST00000571197 3177 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 RNU6-1017P-201ENST00000363613 106 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 RNA5SP396-201ENST00000364834 120 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 GAPDHP55-201ENST00000423136 803 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC093799.1-201ENST00000452411 499 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 RN7SL152P-201ENST00000484176 298 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 Z99943.2-201ENST00000507585 266 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC018523.1-201ENST00000534211 512 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 HIGD1AP9-201ENST00000550710 279 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms